Gene Syncc9605_2322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2322 
Symbol 
ID3736478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2129466 
End bp2131970 
Gene Length2505 bp 
Protein Length834 aa 
Translation table11 
GC content65% 
IMG OID637776904 
ProductATP-dependent helicase HrpB 
Protein accessionYP_382609 
Protein GI78213830 
COG category[L] Replication, recombination and repair 
COG ID[COG1643] HrpA-like helicases 
TIGRFAM ID[TIGR01970] ATP-dependent helicase HrpB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.334263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCAGT TCCCGATAGA CGCCCTGTTG GAGCAGATCT GTTCTGCGGT CCGCCCAGGG 
CAAACGGTTC TGCTCCAGGC ACCGCCCGGG GCAGGAAAAA CCACACGGGT CCCCCTGGCA
CTGATCGGGG CGCTATCGGA AGGTCAGGGC ATTTTTGACG AGCGTCAGAA AATCTGGATG
ATCGAACCGC GGCGGCTGGC CACCAAAGCT GCCGCCGCCC GCCTTGCTGC AAGCCTTGGA
GAAGACATCG GTGCGCGCAT CGGTTATGCG GTGCGCGGGG AACAGAAGCG ATCCGGCCGC
ACCCAGGTGG AGGTGATCAC CGACGGGCTC TTCCTGCGGC GCTTGCAGAG CGACCCCTCG
CTGGCTGGGG TGGGGTGCGT GATCTTCGAT GAATTTCATG AGCGGGGGCG CGATGCGGAC
CTATCCCTCG CCTTGCTGCG CGAGGCGAGG CCTCTACTGA ATTCAGATCT CGCCGTGGTC
TTGATGTCGG CCACGCTGGA TCTGTCCGAC CTAAGGGAAC GGCTGCCCAA AGCGACGGTG
CTGGAAAGCC CGGGCCGCTG TTACCAGGTG GACACCCACC ACCAATCACC ACGGCCGGAC
GAACCCCTGC CGAAGCAGGT TTTACGGGCC ATCGAGCAAC ACGCACTCGA CCAACCGCAG
GGCAGCGGTG TTCTGGTCTT TCTGCCGGGG CTGGCGGAGA TTGAACGCTG CAGGCAGACC
CTGACGGCCG CCCCTTCCCT GCAGAACTGG AAGATTCAGG CGCTGCACGG TCAACTGCCC
TTACAGCAGC AGAGTTCAGC CCTGCAGCGC TGCGACCCAA ACCAAGACGG CAGCATCATC
CTTGCCAGCG CCATTGCCGA GAGCTCCCTG ACGATCGATG GGGTGCGCCT GGTGATTGAC
AGCGGCCTCA GCCGTCAACT GCGTTACGAC CCCAACACCC GCATGGAGAC CCTGGAGACC
ACCGTCTCCA GCCTGGCCAG TGCAGAGCAG CGCCGGGGCA GGGCAGGACG GCAGTGCCCG
GGCCGCTGCA TCCGCCTCTG GTCACCGGCA GAGCAACAGC GACGGCCACC CTTTCACCCC
CCTGAACTGT TGCTGGCCGA TCCACAGCCC GTGTTGATAG AACTGGCCCA GTGGGGGGCT
GGGCTGGGGG AAGAGCTGCC GTGGCTGGAC CCTCCTCCCG CAGCAGCCAT GCAAGAGGGA
CAGCACGGCC TGCAACAGCT CGGCCTGCTG GAGCACGACG GCCGCATCAG CGAACGGGGA
CGACTGATCG GCGGCCTCGG CGTTCACCCT CGTCTCGGCA TGCTGCTGCT GGAGGCCCAT
AAACAGGGCG CCCCCCAGCT GGGGTGTGAT CTGGCAGCCA TCCTCAGTGA ACGGGATCCC
TTTGATCGCC GCCAGATCGG CAGCGATCTC GAGGCCCGGC TCAACAGCAT TCAGCGCCAT
CCTTACCTGC GAACGCTCAG CAAGCAACTT CGCCGCCAAC TGAAGCGACT GGGTGCCTCA
CCCCAAGAGC GAAACGATTC CGTCAATGCC GGCGAGCTGA TCCTGGCGGC CTTTCCGGAA
TGGCTGGCGC AACAGCGTCC AGGCCAGATC GGTCGCTATC AGCTGCGTCA AGGCCGCGGA
GCCACCCTGC TGCCCTGGGA TCCACTCCAG GGCAGTCCAG CCCTGGCCGT CGCCAGGGTC
GACATGGGCG GCCGGGACAC GCAGATCCAG ATGGCCGTGG CCCTGAGCCA GGGCACCCTG
GAGAGCATCG CTGAGCGAGA TGGCCACTGG CATGACGAGG CCAGCTGGGA TCCCGAACGC
GAGCGGGTCC GTGCCGAACG CCAGCTCAAA CTGGGGGCAT TGGTGGTGCG CCGAACGCCA
CAACCTTCCC CAGCCGCAGG GCTGTGCCGC ACTCTCCTGA TCGAGCAGCT GAAGAAGAAT
GCCAGCCTTG ATGCCCTGCC CTGGACGGAA AACAGCCATC AGCTACGCCA ACGGCTGGCA
TGGATGCACC AACAGGTGGG CGTCCCCTGG CCTGGTCGCG ATTTGACAAC CCTGCTGGAG
CAGGCTGACA CCTGGCTTGG TCCAAGCCTG GAGGGCTGCC TGGGCTGGAG TGACATCAGC
GCGACAGCCT TGAAAGAAGC ACTCTGGGGC GATCTGGACT GGAGCTTCAG GCAACAGCTG
GATAACCTGC TGCCGCGCCG CATCCCGATC CCCTCCGGCC GGCAAGCCGC GCTGCATTAC
ACCGCCGACG AGGTGATCCT CGCCGTGAAA CTGCAGGAGA TGTTCGGATC TGACGACGGC
CCCCACGTGC TGAATGGCCG TATTCCCGTC ACGCTGGAAC TGCTCTCACC AGCCGGACGG
CCCCTGCAGC GCACCCGTGA TCTGAAAGGC TTCTGGCAAG GCAGCTACCA GGAGGTGCGC
CGGGAGATGC GAGGGCGCTA CCCCAAACAC CCCTGGCCCG AGGATCCCCG CCAGGCGCTG
CCGACGGCCC GGACCAAACG CAGATCGGAC GGGCGACAAC CTTGA
 
Protein sequence
MSQFPIDALL EQICSAVRPG QTVLLQAPPG AGKTTRVPLA LIGALSEGQG IFDERQKIWM 
IEPRRLATKA AAARLAASLG EDIGARIGYA VRGEQKRSGR TQVEVITDGL FLRRLQSDPS
LAGVGCVIFD EFHERGRDAD LSLALLREAR PLLNSDLAVV LMSATLDLSD LRERLPKATV
LESPGRCYQV DTHHQSPRPD EPLPKQVLRA IEQHALDQPQ GSGVLVFLPG LAEIERCRQT
LTAAPSLQNW KIQALHGQLP LQQQSSALQR CDPNQDGSII LASAIAESSL TIDGVRLVID
SGLSRQLRYD PNTRMETLET TVSSLASAEQ RRGRAGRQCP GRCIRLWSPA EQQRRPPFHP
PELLLADPQP VLIELAQWGA GLGEELPWLD PPPAAAMQEG QHGLQQLGLL EHDGRISERG
RLIGGLGVHP RLGMLLLEAH KQGAPQLGCD LAAILSERDP FDRRQIGSDL EARLNSIQRH
PYLRTLSKQL RRQLKRLGAS PQERNDSVNA GELILAAFPE WLAQQRPGQI GRYQLRQGRG
ATLLPWDPLQ GSPALAVARV DMGGRDTQIQ MAVALSQGTL ESIAERDGHW HDEASWDPER
ERVRAERQLK LGALVVRRTP QPSPAAGLCR TLLIEQLKKN ASLDALPWTE NSHQLRQRLA
WMHQQVGVPW PGRDLTTLLE QADTWLGPSL EGCLGWSDIS ATALKEALWG DLDWSFRQQL
DNLLPRRIPI PSGRQAALHY TADEVILAVK LQEMFGSDDG PHVLNGRIPV TLELLSPAGR
PLQRTRDLKG FWQGSYQEVR REMRGRYPKH PWPEDPRQAL PTARTKRRSD GRQP