Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_2322 |
Symbol | |
ID | 3736478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 2129466 |
End bp | 2131970 |
Gene Length | 2505 bp |
Protein Length | 834 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637776904 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_382609 |
Protein GI | 78213830 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.334263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCCAGT TCCCGATAGA CGCCCTGTTG GAGCAGATCT GTTCTGCGGT CCGCCCAGGG CAAACGGTTC TGCTCCAGGC ACCGCCCGGG GCAGGAAAAA CCACACGGGT CCCCCTGGCA CTGATCGGGG CGCTATCGGA AGGTCAGGGC ATTTTTGACG AGCGTCAGAA AATCTGGATG ATCGAACCGC GGCGGCTGGC CACCAAAGCT GCCGCCGCCC GCCTTGCTGC AAGCCTTGGA GAAGACATCG GTGCGCGCAT CGGTTATGCG GTGCGCGGGG AACAGAAGCG ATCCGGCCGC ACCCAGGTGG AGGTGATCAC CGACGGGCTC TTCCTGCGGC GCTTGCAGAG CGACCCCTCG CTGGCTGGGG TGGGGTGCGT GATCTTCGAT GAATTTCATG AGCGGGGGCG CGATGCGGAC CTATCCCTCG CCTTGCTGCG CGAGGCGAGG CCTCTACTGA ATTCAGATCT CGCCGTGGTC TTGATGTCGG CCACGCTGGA TCTGTCCGAC CTAAGGGAAC GGCTGCCCAA AGCGACGGTG CTGGAAAGCC CGGGCCGCTG TTACCAGGTG GACACCCACC ACCAATCACC ACGGCCGGAC GAACCCCTGC CGAAGCAGGT TTTACGGGCC ATCGAGCAAC ACGCACTCGA CCAACCGCAG GGCAGCGGTG TTCTGGTCTT TCTGCCGGGG CTGGCGGAGA TTGAACGCTG CAGGCAGACC CTGACGGCCG CCCCTTCCCT GCAGAACTGG AAGATTCAGG CGCTGCACGG TCAACTGCCC TTACAGCAGC AGAGTTCAGC CCTGCAGCGC TGCGACCCAA ACCAAGACGG CAGCATCATC CTTGCCAGCG CCATTGCCGA GAGCTCCCTG ACGATCGATG GGGTGCGCCT GGTGATTGAC AGCGGCCTCA GCCGTCAACT GCGTTACGAC CCCAACACCC GCATGGAGAC CCTGGAGACC ACCGTCTCCA GCCTGGCCAG TGCAGAGCAG CGCCGGGGCA GGGCAGGACG GCAGTGCCCG GGCCGCTGCA TCCGCCTCTG GTCACCGGCA GAGCAACAGC GACGGCCACC CTTTCACCCC CCTGAACTGT TGCTGGCCGA TCCACAGCCC GTGTTGATAG AACTGGCCCA GTGGGGGGCT GGGCTGGGGG AAGAGCTGCC GTGGCTGGAC CCTCCTCCCG CAGCAGCCAT GCAAGAGGGA CAGCACGGCC TGCAACAGCT CGGCCTGCTG GAGCACGACG GCCGCATCAG CGAACGGGGA CGACTGATCG GCGGCCTCGG CGTTCACCCT CGTCTCGGCA TGCTGCTGCT GGAGGCCCAT AAACAGGGCG CCCCCCAGCT GGGGTGTGAT CTGGCAGCCA TCCTCAGTGA ACGGGATCCC TTTGATCGCC GCCAGATCGG CAGCGATCTC GAGGCCCGGC TCAACAGCAT TCAGCGCCAT CCTTACCTGC GAACGCTCAG CAAGCAACTT CGCCGCCAAC TGAAGCGACT GGGTGCCTCA CCCCAAGAGC GAAACGATTC CGTCAATGCC GGCGAGCTGA TCCTGGCGGC CTTTCCGGAA TGGCTGGCGC AACAGCGTCC AGGCCAGATC GGTCGCTATC AGCTGCGTCA AGGCCGCGGA GCCACCCTGC TGCCCTGGGA TCCACTCCAG GGCAGTCCAG CCCTGGCCGT CGCCAGGGTC GACATGGGCG GCCGGGACAC GCAGATCCAG ATGGCCGTGG CCCTGAGCCA GGGCACCCTG GAGAGCATCG CTGAGCGAGA TGGCCACTGG CATGACGAGG CCAGCTGGGA TCCCGAACGC GAGCGGGTCC GTGCCGAACG CCAGCTCAAA CTGGGGGCAT TGGTGGTGCG CCGAACGCCA CAACCTTCCC CAGCCGCAGG GCTGTGCCGC ACTCTCCTGA TCGAGCAGCT GAAGAAGAAT GCCAGCCTTG ATGCCCTGCC CTGGACGGAA AACAGCCATC AGCTACGCCA ACGGCTGGCA TGGATGCACC AACAGGTGGG CGTCCCCTGG CCTGGTCGCG ATTTGACAAC CCTGCTGGAG CAGGCTGACA CCTGGCTTGG TCCAAGCCTG GAGGGCTGCC TGGGCTGGAG TGACATCAGC GCGACAGCCT TGAAAGAAGC ACTCTGGGGC GATCTGGACT GGAGCTTCAG GCAACAGCTG GATAACCTGC TGCCGCGCCG CATCCCGATC CCCTCCGGCC GGCAAGCCGC GCTGCATTAC ACCGCCGACG AGGTGATCCT CGCCGTGAAA CTGCAGGAGA TGTTCGGATC TGACGACGGC CCCCACGTGC TGAATGGCCG TATTCCCGTC ACGCTGGAAC TGCTCTCACC AGCCGGACGG CCCCTGCAGC GCACCCGTGA TCTGAAAGGC TTCTGGCAAG GCAGCTACCA GGAGGTGCGC CGGGAGATGC GAGGGCGCTA CCCCAAACAC CCCTGGCCCG AGGATCCCCG CCAGGCGCTG CCGACGGCCC GGACCAAACG CAGATCGGAC GGGCGACAAC CTTGA
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Protein sequence | MSQFPIDALL EQICSAVRPG QTVLLQAPPG AGKTTRVPLA LIGALSEGQG IFDERQKIWM IEPRRLATKA AAARLAASLG EDIGARIGYA VRGEQKRSGR TQVEVITDGL FLRRLQSDPS LAGVGCVIFD EFHERGRDAD LSLALLREAR PLLNSDLAVV LMSATLDLSD LRERLPKATV LESPGRCYQV DTHHQSPRPD EPLPKQVLRA IEQHALDQPQ GSGVLVFLPG LAEIERCRQT LTAAPSLQNW KIQALHGQLP LQQQSSALQR CDPNQDGSII LASAIAESSL TIDGVRLVID SGLSRQLRYD PNTRMETLET TVSSLASAEQ RRGRAGRQCP GRCIRLWSPA EQQRRPPFHP PELLLADPQP VLIELAQWGA GLGEELPWLD PPPAAAMQEG QHGLQQLGLL EHDGRISERG RLIGGLGVHP RLGMLLLEAH KQGAPQLGCD LAAILSERDP FDRRQIGSDL EARLNSIQRH PYLRTLSKQL RRQLKRLGAS PQERNDSVNA GELILAAFPE WLAQQRPGQI GRYQLRQGRG ATLLPWDPLQ GSPALAVARV DMGGRDTQIQ MAVALSQGTL ESIAERDGHW HDEASWDPER ERVRAERQLK LGALVVRRTP QPSPAAGLCR TLLIEQLKKN ASLDALPWTE NSHQLRQRLA WMHQQVGVPW PGRDLTTLLE QADTWLGPSL EGCLGWSDIS ATALKEALWG DLDWSFRQQL DNLLPRRIPI PSGRQAALHY TADEVILAVK LQEMFGSDDG PHVLNGRIPV TLELLSPAGR PLQRTRDLKG FWQGSYQEVR REMRGRYPKH PWPEDPRQAL PTARTKRRSD GRQP
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