Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_2320 |
Symbol | |
ID | 3736476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 2127278 |
End bp | 2128333 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637776902 |
Product | PDZ/DHR/GLGF |
Protein accession | YP_382607 |
Protein GI | 78213828 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.47953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGATCATTG GCCTCGAGCA GGCCGAGGCC CGCCCGGCAA TCCGTCGGGA CTCATTCGTT GCAGCCGCTG TCAAGCGCAG TGGTCCGGCA GTGGTCAGCT TGGAGACGGC CAGGACCGTC AATCAGTCCA GTGTTGCTGG TGTGCCGCCG GCCCTGATGC AGGACCCTTT GTTTCGCCAG TTCTTTGGCA TCCCCCGCTC CACAGCCCCG CGCCCCAGGG TGCAGCGCGG CCAAGGCAGT GGAGTGATCT TCGATGCCAA GGGCCTGTTG CTCACCAATG CCCATGTGGT GGAGGGGGCT GATCAACTCA CCGTGGACCT CTCCGATGGC AGGAGGGTGC CCGCCCGAGT GGTGGGCAAA GACAGCCTCA CCGATCTCGC GGTGGTGCGC CTGAAGGGCC CCGGGCCCTG GCCTGTCGCG GATCTGGGGG ATTCCGACCG GCTCAGCGTG GGCGACTGGG CGATTGCCGT GGGCAATCCC TTTGGCCTGG AGAGCACGGT GACTCTGGGA ATCATCAGCA ACCTCAACCG CAACGTTGCT CAGTTGGGCA TTTCGGGCAA ACGTCTTGAT CTGATTCAGA CCGACGCGGC GATCAATCCC GGTAACTCGG GCGGGCCACT GCTCAATGCC GACGGTGAGG TGATCGGCAT CAACACCCTG GTGCGATCAG GGCCTGGGGC AGGTCTGGGT TTTGCCATCC CGATCAATCG GGCCCGCGCC ATCGCCCAGC AGCTGGTGGC CAGCGGCAAG GCCCGTCATC CGGTGATCGG CATCCGTTTG TCGCCGGTCC CTCGGCCCAC CCCCACATCC CCGGTGCCGC CAGGTGCGGT GATTCGTGCG GTCCAGCCTG GAGGGCCGGC GGACCGCGCC GGGCTCAAAA TTGATGATGT GATCACGCGA TTTGATGGCG AGGCTGTCGC TGACCCCGCT GCGGTGGTCA GTGCCATTGA ACGTCGCGGC GTCGGTGCCA CGGTTGCGCT TGAGGTGAAG CGTGGTCAGG AGCTGGTCAC CATTGACGTC AAGCCAGTCG ATCTTTCGGC TTTGACTTCT GGCTGA
|
Protein sequence | MIIGLEQAEA RPAIRRDSFV AAAVKRSGPA VVSLETARTV NQSSVAGVPP ALMQDPLFRQ FFGIPRSTAP RPRVQRGQGS GVIFDAKGLL LTNAHVVEGA DQLTVDLSDG RRVPARVVGK DSLTDLAVVR LKGPGPWPVA DLGDSDRLSV GDWAIAVGNP FGLESTVTLG IISNLNRNVA QLGISGKRLD LIQTDAAINP GNSGGPLLNA DGEVIGINTL VRSGPGAGLG FAIPINRARA IAQQLVASGK ARHPVIGIRL SPVPRPTPTS PVPPGAVIRA VQPGGPADRA GLKIDDVITR FDGEAVADPA AVVSAIERRG VGATVALEVK RGQELVTIDV KPVDLSALTS G
|
| |