| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2313 |
|---|
| Symbol | |
|---|
| ID | 3736469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 2120753 |
|---|
| End bp | 2122168 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637776895 |
|---|
| Product | Trk family sodium transporter |
|---|
| Protein accession | YP_382600 |
|---|
| Protein GI | 78213821 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.262047 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGATCG GAAGGGCCAT CGAACGGAGC CAGGGCTGGC ATCGTCGGCT CACGGTTCCC
CAGTTCACTG TGGTGACCGG CTTGCTGGTG GTGCTGATCG GCACGCTGCT GCTGGCCACT
CCGCTCTGCT CCTCAAGCAG CGTTGGGCTT TGGGAAGCGT TGTTCACCGC CACATCCGCC
ATCACGGTGA CGGGCCTGTC GATCATCGAC ATCGGCACCG ATCTCACGAC CTTCGGCCAA
GCGTTGCTGG CCTTGATGAT CCTGGCGGGG GGCCTTGGCT TGATGGCCAT CACCACGTTT
CTCCAGGGCT TCGTGGTGCA GGGGACAGCC TTGCGACGCC GGCTGGACCG GGGGCAGGCC
CTGGATGAAT TCGGCGTGGG AGGCGTCGGG CGCACGTTTC GTGGCATTGC CCTGACGGCG
ACGCTGGTGA TCCTGGTGGG GGCTGTGATC CTGTATCACT TCGGCTTCGA TGACATCCCC
AACCACGGAG AACGCCTCTG GGCGGCGGTG TTCCACAGCA TCTCGGCTTA CAACAACGCG
GGGTTCGGGC TCTGGAGCGA CAGCCTCGAG CGCTACCGCA GCAACGGCGT TGTGAATGCC
GTGGTGATGC TGCTGATCGT GACCGGCGGC CTGGGGTGGC GGGTAACCAG CGATCTGAGC
ACGCAGCTGC TGCCCAGGCG GCGAAACCGC CGCCGTCTGA GCCTCCATTC ACGGCTGGTG
CTGCGCACCA ATATGCTCTT GATCGCCTTC GGAGCTGGGG GACTGGTCCT GACGGAATGG
TTGAACCAGG GCGAGATCTT CGCAGGCATG CCGTGGTCCG AGCGCTGGCT CACGGCCTTG
TTCGAATCAG TGACAGCACG CACCGCCGGC TTCAGCACCG TGCCGCTCTC GCTCGACACC
GTCACCGAAT CCAGCCTGCT GTTGCTGATG GTGCTGATGT TCATCGGTGC CAGCCCTGGC
GGCACCGGTG GTGGAATCAA AACCACCACA GTGGCCGCCT TGATGGCGGC CACCCGCTCC
ACCCTGCGGG GGCGGGAGGT GGTCGTGATC CGCAACAGAA CCATCAACGA CAAGGTGGTG
CTGCGGGCCG TTGGCATCAC GGTGGGCTCC CTTCTGTTCG TGATGGCCAT GGCAATGCTG
ATCAGCATCG CCAGCAATTT GAACGGCAAG GATTCGTTCA CCTTCATGGA AATGCTGTTC
ACCTGCATTT CCGCCTTCGC CACGGTGGGC CTGGATCTGG GGGTGACCGT TGAACTTCCC
CGCTTCGGTC AGGCTGTGCT GATGGTGGGG ATGTTTGTGG GACGGCTGGG GATCCTGCTG
CTGCTGAGTG CGATCTGGGA AGCGATGACC CAGGAACAAA TTCAGATGAA TCGCCAGAAT
CGAATCGGAT ATCCCAGCGA GGATCTGTAT GTCTGA
|
|---|
| Protein sequence | MPIGRAIERS QGWHRRLTVP QFTVVTGLLV VLIGTLLLAT PLCSSSSVGL WEALFTATSA
ITVTGLSIID IGTDLTTFGQ ALLALMILAG GLGLMAITTF LQGFVVQGTA LRRRLDRGQA
LDEFGVGGVG RTFRGIALTA TLVILVGAVI LYHFGFDDIP NHGERLWAAV FHSISAYNNA
GFGLWSDSLE RYRSNGVVNA VVMLLIVTGG LGWRVTSDLS TQLLPRRRNR RRLSLHSRLV
LRTNMLLIAF GAGGLVLTEW LNQGEIFAGM PWSERWLTAL FESVTARTAG FSTVPLSLDT
VTESSLLLLM VLMFIGASPG GTGGGIKTTT VAALMAATRS TLRGREVVVI RNRTINDKVV
LRAVGITVGS LLFVMAMAML ISIASNLNGK DSFTFMEMLF TCISAFATVG LDLGVTVELP
RFGQAVLMVG MFVGRLGILL LLSAIWEAMT QEQIQMNRQN RIGYPSEDLY V
|
|---|
| |