Gene Syncc9605_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2288 
Symbol 
ID3736230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2095581 
End bp2096654 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content62% 
IMG OID637776872 
Producthypothetical protein 
Protein accessionYP_382577 
Protein GI78213798 
COG category[S] Function unknown 
COG ID[COG3330] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.757361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0680971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCAAA CCCTGTCATC ACTGGCACGT CTCACCCTTC GTCAACTGCG TCAGATCGCC 
AGCGACTTAG GGGTGCCGCT CTACAGCCGC AAAAGCAAGG AGACCTTGGT CGACGAGGTT
GCAAAGCGTC AGCAGAAGCG CGGTGGAGAC CTGAAGGCCA TCGAGGCTGA GCTCAACGCA
CCACCTATCG GCAGCAGCGA GACCCGCGTG GTGTTCCTGC CGCGTGATCC CCAGTGGGCC
TATGTGTTCT GGGAGATTTC GGACACCGAC CGGAAGGTGG CCCAGAAAGA TGGCGCCAGC
CGGCTCTGCC TACGCCTGGC AGACGTGACC GGGATGCAGG ACGGCAACGC CCATCCCCAT
ACGCTGCAGG AAGTGCCCGT CGACAGCCAC AGCACCGAGT GGTACTTGCC AGTGCCTCTC
TGCGACCGGG ATTATCGGGT GGAACTGGGC TACCGCATCG GCTCCAACTG GATGTCGTTG
GCCTTCTCTT CAGTGGCCCG CGTTCCCGCT CTCCACCCAA GCGAGCAGAT CCTTGATCAG
TTCGTGCCCT TCAGCCTCGA TGCAGCCCCG GCCGAACCGG TTGCAACTCC CGTCGCACCG
ATTGAATCCA GCAACAGTGG TCTGCATGAG CGGCTCTACC AAAGCGCCAC GGTTCACTAC
CGGAGACGTC GGGTTGGCTC TGAAGAATTC CAAGAAGGCT TCGACACTTC GGCTGACACG
TCCGGCTTGA ACGACTCAGG TGCTGGACTC TGGGCCAGCG GCCGCAACGA GTCGGGCATT
GGTGGCGTAG CTCCTCGCCA ACGATCCTTC TGGCTGGTGG CTGACGCAGA ACTGATCGTC
TACGGCGCCA CCGACCCTTC GGCCCGTCTC ACCATCGGTG GAGAAGAAGT GCCTCTTTCC
ACCGATGGCA CCTTCCGGAT TCAAGTGCCC TTCCGCGATG GCCAGCAGAT GTACGGCATC
GAAGCCACCG CTTCCGATGG AGAGCAAAAG CGCAACATCA CGCTCAACTT TGAGCGCCAG
ACGCCCGAAG ACAACAGCAA CCCTGCAAGC GAAGCCCGCG CCGAGTGGTT CTGA
 
Protein sequence
MSQTLSSLAR LTLRQLRQIA SDLGVPLYSR KSKETLVDEV AKRQQKRGGD LKAIEAELNA 
PPIGSSETRV VFLPRDPQWA YVFWEISDTD RKVAQKDGAS RLCLRLADVT GMQDGNAHPH
TLQEVPVDSH STEWYLPVPL CDRDYRVELG YRIGSNWMSL AFSSVARVPA LHPSEQILDQ
FVPFSLDAAP AEPVATPVAP IESSNSGLHE RLYQSATVHY RRRRVGSEEF QEGFDTSADT
SGLNDSGAGL WASGRNESGI GGVAPRQRSF WLVADAELIV YGATDPSARL TIGGEEVPLS
TDGTFRIQVP FRDGQQMYGI EATASDGEQK RNITLNFERQ TPEDNSNPAS EARAEWF