| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2276 |
|---|
| Symbol | |
|---|
| ID | 3736218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 2085162 |
|---|
| End bp | 2086736 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637776860 |
|---|
| Product | putative protease |
|---|
| Protein accession | YP_382565 |
|---|
| Protein GI | 78213786 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.494839 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCAGGTG CACCAAGGAT TGGAAGACGG GGTTGTTGTC GATGGCCTGC GATGACGTCT
CGCGCACGGG TGAGTGCCCA CTGGCTCAGC AGGGCATTGG CGGCGTTGCC GGTTCTGGCC
CTGGTCAGTC CCTTCGGCGC GCGGGCCCTG GCGGGTCAAT CGTCCCCGCC ACTCCGTTGG
CAGGTCTGTA ATAACGACAC CTTGGCCTCC CAAGGCTACG AGTGCGCCAG CTTCACCCGT
CCGCTCCGCC GATCTAAGCC CGATGGCCCA CAGGTTGAGC TGGCGGTCTT CCGGCTTCCG
GCCACGGGGT CGGCCCAGGA GCGGATCGGC ACGCTCTTTT TCAATCCCGG CGGTCCAGGA
GCCCCCGGAC ATGGCAGTGC TGTCAAGGGA CTGCTCTTGC CTGAGGAGGT GCGGCGCTCC
TTTGACTTCT TCACCTGGGA TCCCCGGGGG CTTCGCCAGT CCAGACCTGC GTTGGCTGAT
TGCGCGGTGG CTATGCCCCA CCGGCCGGCC ACAGGACCCG TCGATTGGCA GTGGGTGTTG
ATGCAGCGTC AGCGGGAGCT GGCCGAGAGC AACCGCTACT GCATTGCCCG ACACCGCAAA
TTGATCCCGC AGATGGGCAC GGTTGAGGCG GTCCACGACT TGGACGCCCT CCGCCAAGCC
GTGGGCGATG ACCGCCTCAA TTTCTGGGGG GTCTCTTATG GAACTGTGAT CGGCTCCACC
TATGCAGCGC TGTTCCCCGG GCAGGTTCGC GCTCTGGTTC TCGATGGAAA TGTCGATCCC
TGGATTGATC TCGGTGGTTT GCGTCACTCC GCTACTGCAC CCGATGACGC GATTCGCTTC
TTCCTGCAGC TGCATCCCGA CCTGAAACGT CCACTGCAGC GTTCGCTAGC CCGGCTGGCC
CGAGAACCCC TCACCCTGCC CGACGGCAGC TCATACACCC GCTGGGATCT GTTGGATCCC
TTGGTCAACT ACATCTTCAT TTCCAGAGTG TCCGGGACCT ATGGACGCAC CATGATCGAA
ACGGTGCACC AGGCCTTGTT TGGAGCTCCG GCGGAGCAAA CCGCGGCGCT GACGACGTTG
GAGCACCCCC TGTTGCGCAG TCCAAGCCGG GATACCAACG CTGGCGCTGG TTTTGCCGCC
GTCGCTTGTC AGGACTTTCC CCAGCGGCCG TCCCCGCAGC AGCAGGCGGC CTGGCTCGGC
GATCTCACCC GTCAGGCCCC GCTTTATGGC GGCAGCCTTG GAGTGAACTT TCTTGCCCTC
TGCAGCGGCT ATGAGGATCT GCATGCCAGC ACACCTGTGC CTCGCGCTCC CTTCCCCGAG
CGTCGCGTCT CCGGCTTGAT CATCGGCTCC AGTTGGGATG CCGCCACCCC CTGGGTTTGG
TCTGCTGCGA TGGCCCGGGC CTTCCCGTCG ATGCGCACTC TCCAGGTGGT CGGCAACGAG
CACGGCATCT ACACCAATGC CCAGTCCTCC TGCATGGAGG AGGCCGTGAG CGACTACCTG
CTCAAGGGCA CCGTGCCGCC CACGGATCTG AGTTGCCCCT ACGTGAAACC GGCCAAGCAG
CAGTCCTTCC CTTAA
|
|---|
| Protein sequence | MSGAPRIGRR GCCRWPAMTS RARVSAHWLS RALAALPVLA LVSPFGARAL AGQSSPPLRW
QVCNNDTLAS QGYECASFTR PLRRSKPDGP QVELAVFRLP ATGSAQERIG TLFFNPGGPG
APGHGSAVKG LLLPEEVRRS FDFFTWDPRG LRQSRPALAD CAVAMPHRPA TGPVDWQWVL
MQRQRELAES NRYCIARHRK LIPQMGTVEA VHDLDALRQA VGDDRLNFWG VSYGTVIGST
YAALFPGQVR ALVLDGNVDP WIDLGGLRHS ATAPDDAIRF FLQLHPDLKR PLQRSLARLA
REPLTLPDGS SYTRWDLLDP LVNYIFISRV SGTYGRTMIE TVHQALFGAP AEQTAALTTL
EHPLLRSPSR DTNAGAGFAA VACQDFPQRP SPQQQAAWLG DLTRQAPLYG GSLGVNFLAL
CSGYEDLHAS TPVPRAPFPE RRVSGLIIGS SWDAATPWVW SAAMARAFPS MRTLQVVGNE
HGIYTNAQSS CMEEAVSDYL LKGTVPPTDL SCPYVKPAKQ QSFP
|
|---|
| |