Gene Syncc9605_2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2263 
Symbol 
ID3736967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2076575 
End bp2077105 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content69% 
IMG OID637776850 
Producthypothetical protein 
Protein accessionYP_382555 
Protein GI78213776 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.596766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTCGTC CGCTGCTGAT CCTGCTCGCC AGCCTGGCGC TGGCGGGCTG CAACGGTCGC 
AGTGAACGGG CCAGTGGTGG CGTGCTCTCC ACCAGCCAGC AGGCCCCAGC TCTGAGTGGC
AGTGGTGAGT GGCTGGCGGT CGTCAGCGAT CACGGCGGCC GACCCACAGT GCAGCTGCGC
CGCCTCAGCG ATGGATCCGT TGTCTCTGTT CCCCAGCTGA GCCGACATCA GCCCCACAGC
TCCCCCTCCC TGAGCTGGAA CGGCCGATAC CTGGCAGCGA TCACCCAGCG GGGGCGCCGC
CGACTTGCGG TGGTGACCGA CCGTCTGAAC GGACGCATGC ACCCCCTGCC GCTGCCCGGG
GGCCGAGACC CAGTGCTGCT CAGCCTTGCG CCGGATGCAC AGCAGATCGC CCTGCAGGTG
ACGGATCAAG GCCGGTGGCG CGTGGAACTG CTGGATCTGA GTGATCTGCT CGAGCCGGAT
CGTCCTCCGG GGCAGAGCCT CTCCACACCG GCGCTGTCGT CAGAGCCATG A
 
Protein sequence
MPRPLLILLA SLALAGCNGR SERASGGVLS TSQQAPALSG SGEWLAVVSD HGGRPTVQLR 
RLSDGSVVSV PQLSRHQPHS SPSLSWNGRY LAAITQRGRR RLAVVTDRLN GRMHPLPLPG
GRDPVLLSLA PDAQQIALQV TDQGRWRVEL LDLSDLLEPD RPPGQSLSTP ALSSEP