Gene Syncc9605_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2258 
Symbol 
ID3736961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2072212 
End bp2073495 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content67% 
IMG OID637776844 
Producthypothetical protein 
Protein accessionYP_382550 
Protein GI78213771 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0763] Lipid A disaccharide synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.872637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.691996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTCGTC CCCGCGCAGC AGAACCAGGA CCGGCCGTCG TTCTCGTTTC AAACGGTCCC 
GGTGAGCTGA CAACCTGGGT CAGACCCCTC GCGGAACGAC TGCATTCCAG CCTTCGCTTG
CGACCTCGGT CGTCGGAGGC ACCAGCCTCC CTGCATCTGG TGTTGGTGCC CTGTCCCAAT
GCCACCGGCC AGGAGCGCGC GGCAGCGGAG CCCTGGGGCT TGTTCGAGCG CATCGTGCCG
GCTGGACGCT TCTGGTTGCT GCTGCTGCGT CCCCGGCGCT ACGGCCCATG GCCGCAGAAG
GGTGTTGTGG TCTTCCTGGG AGGTGATCAG TTCTGGACTG TTCTTCTTTC GGCCCGTCTC
GGCTACCACC ACATCACATA TGCCGAGTGG GTGGCGCGCT GGCCGGGCTG GAACGATCGG
ATTGCGGCGA TGTCGGACGC GGTGCGCCGC CAGCTGCCGG TGCGTTACCA GCCCCGATGC
CGCGTGGTCG GCGATCTGAT GGCGGATTTG TCCTCCTTCG CTCGCCGAGA GGATCCTCTT
CCCGGGGGCC AGTGGGTGGG CCTGCTGCCT GGGTCCAAGC CGGCCAAGTT GAGCGTCGGT
ATGCCGTTTC TGCTCGACAC CGCCGATCGT CTGGCTCGGT TGCAACCCGG ATGTCGCTTC
CTGCTGCCGT TGGCACCCAC CACAAGCGTT GATGAGTTGC TGCGTTTCGC CGGCACATCC
AACCCGATTG CTGCCCGCTA CAGCGCTTCT GTGGCGTCGG TGGAGCAAGG CGAGTCGGTG
ACGGAGTTGG TCACGAGGGC GGGGACGCGG ATTCGTCTGC TGGAGCAGCA TCCGGCCCAT
GGCCCCCTGA GCCAGTGCGC CCTGGCCCTG ACCACGGTCG GTGCCAACAC AGCCGAGCTC
GGCGCCCTTG CCGTGCCGAT GATCGTGATT GTTCCCACCC AGCACCTGGA GGTGATGCAG
GCCTGGGACG GCGGGCTGGG CCTGCTGGCG CGTCTGCCGG GATTGCGGCG TCTGATCGGT
GTTCTGTTGA GCCTCTGGCG TCTGCGCAAC AACGGGTTGA TGGCCTGGCC GAACATCAGT
GCGGGCCGCG CCGTGGTGCC GGAGCGGGTG GGGGCGATCA CACCGGCGGA CATAGCGAAG
GAGGCCTGCG ATTGGCTGGA CGCCCCCGAG CGGCTTGAGG GCCAGCGCCA GGACCTCCAG
GCCTTGCGGG GAGAACCCGG GGCGGTGGCC GCGTTGGCTG CAGAGGTGAG GGGGTTGCTT
CCCCGAGAGC TCAGTGGTTC CTAG
 
Protein sequence
MARPRAAEPG PAVVLVSNGP GELTTWVRPL AERLHSSLRL RPRSSEAPAS LHLVLVPCPN 
ATGQERAAAE PWGLFERIVP AGRFWLLLLR PRRYGPWPQK GVVVFLGGDQ FWTVLLSARL
GYHHITYAEW VARWPGWNDR IAAMSDAVRR QLPVRYQPRC RVVGDLMADL SSFARREDPL
PGGQWVGLLP GSKPAKLSVG MPFLLDTADR LARLQPGCRF LLPLAPTTSV DELLRFAGTS
NPIAARYSAS VASVEQGESV TELVTRAGTR IRLLEQHPAH GPLSQCALAL TTVGANTAEL
GALAVPMIVI VPTQHLEVMQ AWDGGLGLLA RLPGLRRLIG VLLSLWRLRN NGLMAWPNIS
AGRAVVPERV GAITPADIAK EACDWLDAPE RLEGQRQDLQ ALRGEPGAVA ALAAEVRGLL
PRELSGS