Gene Syncc9605_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2245 
Symbol 
ID3737976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2057274 
End bp2059169 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content55% 
IMG OID637776831 
Producthypothetical protein 
Protein accessionYP_382537 
Protein GI78213758 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.67793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.307121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTTG AGATTCGTGA CCACTTAGCC AATCTGCAAC CAGACGGAGG CACAAACACA 
CCCAATGGAG ATCACAGCTT TCTCTGCCCA GTACCGGGCT GTGGAGCCCC AAACTTCAAG
GTGAACCTCA GTACTGGCAA ATGGGCTGCT TATGGCTGCA ACTGCAGCAG CACTGAAAAG
GGCAAACGGT CAATCCGAAA TGCCCTGTCC CCCGCGATAA ATCCAAATCA AGGTTCGAAC
AGAACCTTGA AATCGATCCG CCCCAAAGGT CGCCGCAGCT GGGTCTACTG CGATGAAAAG
GGCCAACCGA CGCTGGAAGT TCACCGGACA GATGACGGAA AGGGCAAACG CAAGATCTGG
CAGGAGAGCC TGATTGATGG CTATCGACCC AGAGAACTGG CAGATCGGGT TGTTCCCTAC
GGATTAAGTG AGGCAAAGCA AGCCCTCATA GATGGAGCGC CCTACGTGTT CATCCCTGAA
GGAGAGCCAT GCGCTGATGC TTTGAGGCGA CTCGGATTGA ACGCTGTGGC CACCCTTGGC
GGTTGTGAGG GTTTCAATCC GGAACGGGAT GGCGGCCACT TCGATCCAAC AAGAGTGGTT
GTGGTGGCTG ACCAAGATCA GGCGGGGGTG AAGTACGCCC GCAAAGTGGC GAGCGCCTAT
CCCGGCTGTC GGTGGCTACT GGTTTACCCC GGCACACCTG AGTGGAATGG TGCGATGCCA
AAGGATGGCG GGCTGGACGT AGCCGACTGG ATTGCAGACG GTGCATCCAT AGAGGACGTG
CTCAATGGAG TCCAGGAGGA CAACCCCTTC GTGAGCCAGG AGCCTGAACC AGACCTAAGT
CACTTGGCTG AACTCATCGC AAACTCTGCC CAGGGGGGTG TGCGGGACCT AGGAAAAATC
TGGCGGGTTA ACCAGTTCGC AGCCAGCGGC ATCGTTTTAC TGGCTGCCGA TTCAGGCACG
GGCAAGACCA CCTTGATGAA CCTCTGCATA GAGGCAATTC AAGAAGGAAC TCCATTTCTG
GGGGTGTTCA AGACAGAACA AGCGAATGCA CTGCTGATCC AAGGAGATGA ACCTGAGAAG
TTCGCTGAAC GGAAGTTCCG GCGACAGGAG CTGAAACGCA ACTTCGATGT CATCTACCCC
GAAGGTCCGT TCCCTCTTGA AGAGCTTTTC GAAGCCATTG AGTCGCGTAA GTGGTACGTC
ATCGGGATTG ACAGCTTGAC CACCGTGCTG AGCAGCGAAG GGCAGCGGAC AGTTGATTTT
GAAATTGTCG ACCTTCTGTA CAAGCTCAAC AAAGCAGCGG TTAACAACAA CGTACTGCTT
CTAACGACTG CCCATCTCAA CAAGACCCGC CAAGGCGGCA ATGGCGTCAG ACGAAAGCGT
ACGGAGATTC AGTGGGAAGA CATCAGCGGT ATCAACACGA TCAGTGCGGC CGTTCAAGAC
TGCTGGGGAC TGACAAGCCT TGAGGTCGAG CGGTTTTCAC TCCATGCCCT CGGCAAGCGA
AACATCGTGG AAGGCACCAA ATGGCTTCTT CATCGGGACC GTGAGACATA CAACTGGTGG
CTTGCGGATG AACAAGACCA GCAACTACCC ACCGACGCAG AAAGGCTGGG AGCGAGGGTC
CTTACGCATG TTCAACAGCA CGGCTACATG TCCATCAACG AGATGGTGAT AGCTCTCGGT
GGAAACGCAG AACATGCCCG GTTGGTTTGC TTTGACCTGT TTGAACAGGG TCGGCTCCAG
CGGCATCCGC GGAGAACTGG CAAGCGTGGG CGTCCCGAAT ACCTATATGG GGTTGGCGAT
TTTTCCCATG TCACGCACAC CCCCACTTCA ACAACAGTTC CGTACATAGG TGGTGAAGAC
GATCCGGCAT GGGGCCCACG TCCGGAGGTC GTCTGA
 
Protein sequence
MGFEIRDHLA NLQPDGGTNT PNGDHSFLCP VPGCGAPNFK VNLSTGKWAA YGCNCSSTEK 
GKRSIRNALS PAINPNQGSN RTLKSIRPKG RRSWVYCDEK GQPTLEVHRT DDGKGKRKIW
QESLIDGYRP RELADRVVPY GLSEAKQALI DGAPYVFIPE GEPCADALRR LGLNAVATLG
GCEGFNPERD GGHFDPTRVV VVADQDQAGV KYARKVASAY PGCRWLLVYP GTPEWNGAMP
KDGGLDVADW IADGASIEDV LNGVQEDNPF VSQEPEPDLS HLAELIANSA QGGVRDLGKI
WRVNQFAASG IVLLAADSGT GKTTLMNLCI EAIQEGTPFL GVFKTEQANA LLIQGDEPEK
FAERKFRRQE LKRNFDVIYP EGPFPLEELF EAIESRKWYV IGIDSLTTVL SSEGQRTVDF
EIVDLLYKLN KAAVNNNVLL LTTAHLNKTR QGGNGVRRKR TEIQWEDISG INTISAAVQD
CWGLTSLEVE RFSLHALGKR NIVEGTKWLL HRDRETYNWW LADEQDQQLP TDAERLGARV
LTHVQQHGYM SINEMVIALG GNAEHARLVC FDLFEQGRLQ RHPRRTGKRG RPEYLYGVGD
FSHVTHTPTS TTVPYIGGED DPAWGPRPEV V