Gene Syncc9605_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2198 
Symbol 
ID3737093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2012790 
End bp2013278 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content60% 
IMG OID637776786 
Productallophycocyanin, beta subunit 
Protein accessionYP_382492 
Protein GI78213713 
COG category 
COG ID 
TIGRFAM ID[TIGR01337] allophycocyanin, beta subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.209436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACG CCATCACCAA CGTCATCAAC AAGTCGGACG TCCAGGGGCT TTACCTGGAC 
ACGGCTTCGA TGGGCAGCCT CGAGTCGTAT TTCGCCAGTG GTGAACTACG TGTGCGCGCT
GCTGCCACCA TCAGCGCTAA CGCTTCGGCC ATCATCCGTG ATGCCGTTGC CAAAGCCCTG
CTGTACTCGG ACATTACCCG TCCCGGCGGC AACATGTACA CCACTCGCCG CTACGCCGCC
TGCATTCGCG ACCTGGACTA TTACCTGCGG TATTCCACCT ACGCCATGCT GGCCGGAGAT
ACCTCGATCC TCGACGAGCG TGTTCTGAAC GGCCTCAAGG AGACCTACAA CTCCCTGGGC
GTTCCCATCG GCGCCACCGT TCAGGCCATC CAAGCCATGA AGGAAGTCAC CGCCGGACTT
GTCGGCCCTG ATGCCGGCAA GGAAATGGGT GTTTACTTCG ACTACATCTG CTCCGGTCTC
GGCAACTGA
 
Protein sequence
MQDAITNVIN KSDVQGLYLD TASMGSLESY FASGELRVRA AATISANASA IIRDAVAKAL 
LYSDITRPGG NMYTTRRYAA CIRDLDYYLR YSTYAMLAGD TSILDERVLN GLKETYNSLG
VPIGATVQAI QAMKEVTAGL VGPDAGKEMG VYFDYICSGL GN