| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2186 |
|---|
| Symbol | |
|---|
| ID | 3735398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 2001114 |
|---|
| End bp | 2001863 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637776774 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_382480 |
|---|
| Protein GI | 78213701 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02466] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.576025 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTGCTGTG TTATCGGTGA AGCGCAGCGG TTGGAGGGTG TGGGCGTGCT TCAGCTTCAT
CAGCTCTTTC CCACTGTGGT TGCAACAACT CAACTGCCTC TCGACCCCCT GCAGCAGGCC
TCCTGCATGC AGGCTCTGCT GGCGCTTCGC GGTGAAGCCG ACGGCAACTC CAGCGAGGGC
TGTGCCTGGA CGGGGGACCT GCACGGGGTG TGGCAGCTGC ATCAACAGGA GCCCTTTCAG
GACATGGCCC AGTTGGTGGT GGATCAGGCC TGGAGCTATC TCGATTCGCT TGGGTTTGAG
CGAAGCCAAG TGGCTCTGCA TCTGCAGCGT TGCTGGCCGG TTATCAGTAA TTGGGATCAA
GCGGTTGGTC GCCACCATCA CCCCAATGCC CATCTCAGCG CTGTTCTTTA CCTCACGGGT
AACGGCTCTG GTGAGGAGGG CGTGTTGCGG CTGTATGCGT CACATAAAAC CAATGAGTTG
GTGGCGGGTT TGGCGGTGGG TTATGGCGGC CCGATTGCTG AAGGCCACCC GTTGAATCTG
GCCTACTGGG ACCTGGCACC ACGCCCGGGT TTGCTGGTGC TGTTTCCGTC GAGCCTGCAG
CACAGCGTTC TGCCCAACGA TGCCCCAGAC GAGCTGCGCT GTTCGATCAG TTTTGATTTC
GTGCTTACAG CACCAGTGCA GGGTGGTTCG CCGGAATATC TGGCGCCCCA CCCCCGCCTT
TGGGACTCGC TGGACGAGCC CATTGCCTGA
|
|---|
| Protein sequence | MCCVIGEAQR LEGVGVLQLH QLFPTVVATT QLPLDPLQQA SCMQALLALR GEADGNSSEG
CAWTGDLHGV WQLHQQEPFQ DMAQLVVDQA WSYLDSLGFE RSQVALHLQR CWPVISNWDQ
AVGRHHHPNA HLSAVLYLTG NGSGEEGVLR LYASHKTNEL VAGLAVGYGG PIAEGHPLNL
AYWDLAPRPG LLVLFPSSLQ HSVLPNDAPD ELRCSISFDF VLTAPVQGGS PEYLAPHPRL
WDSLDEPIA
|
|---|
| |