Gene Syncc9605_2177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2177 
Symbol 
ID3735603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1993326 
End bp1994324 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content67% 
IMG OID637776765 
Producthypothetical protein 
Protein accessionYP_382471 
Protein GI78213692 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.384198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCG ATCTCCTGGT GCTGTTGCTG CTGGTTTTGG TGGTGCTGCT GGGTTCGGCC 
CTCTGCTCCG GAGTGGAAGC TGCCCTGCTG ACCGTGAGTC CGATCCGGGT GCACGAGCTG
GCGGCCCGGG AACGCCCCGT GGCCGGGGCC AGGCGGCTGG CGCAATTGCG TCAACGGCTG
GGGCGCACCC TGTCGGCTCT GGTGATCGCT AACAACGGCT TCAACATTTT CGGCAGCCTG
ATGCTGGGCG GTTATGCCGC CTGGGTGTTT GAGCAGCGCA AGATCAGCGG TGTGGCCCTG
CCGGTGTTCT CGGTCGGGCT GACTGTCCTG GTGATCCTGC TGGGGGAAAT CCTGCCCAAA
GCCCTCGGAA GCCGTCTGGC CCTGCCGGTG GCCCTGGCCA GCGCACCCCT GTTGCATTGG
CTCGGCCTGG CGCTGCGGCC GCTGGTGCTG CTGCTGGAAC GGATGCTGCC GGCCATCACT
GCCGAAGCGG AACTCAGCAC CAATGAGGAG GAGATCCGTC TGCTGGCCCG CCTGGGCTCC
CAGAAAGGAG AAATCGAAGC CGATGAAGCC GCGATGATCG GCAAGGTGTT TCAGCTGAAC
GACCTCACCG CCCGCGACCT GATGACGCCG CGGGTGGCGG CGCCCACCCT GGACGGCAGC
CTCAGCATCG AAGCCCAGCG GGCCAAGCTG ATGAGCACCA ACGATCCCTG GTGGGTGGTG
CTGGGCGACC AAGTGGACAA GGTGCTCGGG GTGGCCAGCC GCGAGCGGGT GCTCACCGCC
CTGTTGGAGA ACCGCGGCCT GCTCACACCC GTTGACCTCT GCGAACCGGT GGAATACGTG
CCCGAGATGA TCCGGGCCGA TCGGCTGCTG ACGGGCTTCC GGCGCGACAG CGGTGGCGTA
CGCGTTGTGG TGGATGAATT CGGTGGCTTT GTCGGCGTGA TCGGTGCCGA ATCCGTGCTG
GCCGTGCTGG CCGGCTGGTG GCGCAAGCCG GCAGCATGA
 
Protein sequence
MSSDLLVLLL LVLVVLLGSA LCSGVEAALL TVSPIRVHEL AARERPVAGA RRLAQLRQRL 
GRTLSALVIA NNGFNIFGSL MLGGYAAWVF EQRKISGVAL PVFSVGLTVL VILLGEILPK
ALGSRLALPV ALASAPLLHW LGLALRPLVL LLERMLPAIT AEAELSTNEE EIRLLARLGS
QKGEIEADEA AMIGKVFQLN DLTARDLMTP RVAAPTLDGS LSIEAQRAKL MSTNDPWWVV
LGDQVDKVLG VASRERVLTA LLENRGLLTP VDLCEPVEYV PEMIRADRLL TGFRRDSGGV
RVVVDEFGGF VGVIGAESVL AVLAGWWRKP AA