| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2172 |
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| Symbol | atpC |
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| ID | 3735598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 1988865 |
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| End bp | 1989275 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637776760 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_382466 |
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| Protein GI | 78213687 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.100722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCTCA CCCTCCGCGT GCTGGCAACA GACCAGAACG TCTTTGATGG CAGCGCCGAT
GAGGTGATCC TGCCCAGTAC CACCGGTCAA CTCGGTATCC TGCCTGGCCA CATCTCCCTG
CTCACCGCCA TCGATATCGG TGTGCTGCGG GTGCGTGCCA ACGGTGCCTG GAACTCCATC
GCTCTGATGG GTGGTTTCGC CGAAGTGGAC GCCGATGAAG TCACCGTTCT GGTGAACAAG
GCCGAACTGG GCAGCTCCAT CGATGCCGCT GCAGCCGAGA CCGCTTTCCA AAAGGCAACC
ATCATGGTGG CTGGCATGGA AGGTCAACCG TCTTCTCCGG AAAAGCTCAA AGCCCAGCAA
CAGCTCAATG AAGCTCGCGC TCGCCTTCAG GCCAGCAAAA CTGCCGACTG A
|
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| Protein sequence | MSLTLRVLAT DQNVFDGSAD EVILPSTTGQ LGILPGHISL LTAIDIGVLR VRANGAWNSI
ALMGGFAEVD ADEVTVLVNK AELGSSIDAA AAETAFQKAT IMVAGMEGQP SSPEKLKAQQ
QLNEARARLQ ASKTAD
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