Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_2150 |
Symbol | |
ID | 3737213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 1968343 |
End bp | 1969929 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637776737 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_382444 |
Protein GI | 78213665 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.204731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.434509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAG TTCTTGTCTC CGATCCGATC GACCAGGCCG GGGTCGACAT CCTTGACCAA GTGGCGCAGG TGGATCAGCG CACCGGCCTC TCTGAGGAGG AGCTGATCGG GATCATCGGT GAGTACGACG GATTGATGAT CCGATCCGGC ACCCAGGTGA CCGCAGCGGT GATCGCGGCG GCGAGCCGGC TCAAGATCAT CGGCCGCGCC GGCGTCGGCG TCGACAACGT TGATGTGCCT GCGGCCACCC AGCGGGGTGT GCTGGTGGTG AACTCGCCGG AGGGCAACAC CATCGCTGCA GCGGAGCACG CTCTGGCGAT GATGCTGACC CTCTCGCGGC ACATTCCTCA GGCCCATGGC GGCATGCGGG CCGGCAAGTG GGATCGCAAG AAATTCGTCG GCAACGAGCT CTACAAAAAG ACCCTGGGGG TGGTCGGTCT TGGCAAGATC GGATCCCACG TCGCCAGGGT TGCCCAGGCC ATGGGCATGG AGGTGATCGC CTACGACCCC TTCATTGCCG CTGACCGGGC TCAACGGATG CAGGTGAAGC TGCTGGAGCT GGATGAGTTG TTCCGCACCG CCGACTACGT CACTCTGCAC ATCCCGCGCA CCAAGGACAC CGAGAACCTG GTGAATGCAG AACTGCTGCG CACGATGAAG CCCACGGCGC GGATCGTGAA CTGCGCCCGT GGCGGTGTGG TGGATGAGGC GGCGATCGCT GAAGCGATCA ACAACGGTGT GATCGCCGGC GCTGGCCTTG ATGTGTACGC CAGTGAGCCT CTGGCGGAAG ACTCCCCCCT GCGGGCGGTG GAGCGTGGTC TGGTGCTGAC GCCTCACCTC GGTGCGTCGA CGGAAGAGGC CCAGGAGAAT GTGGCGATTG ATGTGGCAGA GCAGATCCGC GATGTGCTGC TGGGTCTGCC GGCCCGTAGT GCGGTCAACA TTCCCGGCCT CAGCGCAGAG ATCATGGAGC GGCTCAAGCC CCATCTCCAG CTCGCTGAGA CGGTTGGTCT GCTCGTTAGT CAGCTGGCTG GTGGTCATGT GCAGGAGATG GAACTGCGGT TGCAGGGTGA ATTCGCCAGC CATCCCTCTC AGCCTCTGGT GATTGCTGCT CTGAAGGGTC TGCTCAGTGC TGGCCTTGGC GACAGCATCA ACTTCGTGAA TGCCTCGCTT GAGGCCAAGG CCCGCGGCAT TCAGGTGCTG GAGGTGAAGG ATGAGAGCAG CCGCGACTTC GCCGGTGGTT CACTGCAAAT CACTACCCGT GGTGACCAGG GCAGCCGCAG TGTCACCGGT GCCGTCTTTG CCGATGGCGA TCTGCGCATC ACCAGCATCG ATGCCTTCCC GGTGAATGTG ACCCCCAGCA GCCACATGCT GTTCACCCGA CACCGGGACA TGCCCGGAAT CATTGGTCAC CTGGGCTCTC TGCTGGGCGA ACACAACGTC AACATCGCCT CCATGCAGGT GGGCCGCAAA ATCGTGCGCG GCGATGCGGT GATGGTGCTC AGCATCGATG ATCCGATCCC AGCAGATCTG CTGCAGACGA TCACGGCCAT CGATGGCATC CAGGAAGCGC ATCCGGTCAC GCTCTGA
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Protein sequence | MTKVLVSDPI DQAGVDILDQ VAQVDQRTGL SEEELIGIIG EYDGLMIRSG TQVTAAVIAA ASRLKIIGRA GVGVDNVDVP AATQRGVLVV NSPEGNTIAA AEHALAMMLT LSRHIPQAHG GMRAGKWDRK KFVGNELYKK TLGVVGLGKI GSHVARVAQA MGMEVIAYDP FIAADRAQRM QVKLLELDEL FRTADYVTLH IPRTKDTENL VNAELLRTMK PTARIVNCAR GGVVDEAAIA EAINNGVIAG AGLDVYASEP LAEDSPLRAV ERGLVLTPHL GASTEEAQEN VAIDVAEQIR DVLLGLPARS AVNIPGLSAE IMERLKPHLQ LAETVGLLVS QLAGGHVQEM ELRLQGEFAS HPSQPLVIAA LKGLLSAGLG DSINFVNASL EAKARGIQVL EVKDESSRDF AGGSLQITTR GDQGSRSVTG AVFADGDLRI TSIDAFPVNV TPSSHMLFTR HRDMPGIIGH LGSLLGEHNV NIASMQVGRK IVRGDAVMVL SIDDPIPADL LQTITAIDGI QEAHPVTL
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