| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2146 |
|---|
| Symbol | psbV |
|---|
| ID | 3737209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 1965904 |
|---|
| End bp | 1966464 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637776733 |
|---|
| Product | cytochrome c-550 |
|---|
| Protein accession | YP_382440 |
|---|
| Protein GI | 78213661 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03045] cytochrome c-550 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.851244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.117545 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATACAAG AGCTTGGTGC GGTGAATGCG TCACACCCCC TTACCTTCAT GGCCTCTGTG
TTCTCTTCCT TGCGTCGGTC CCTGAAGGGC CTTCTGGTCC TCATCCCGGT GCTGATCGGT
TTGGCCGTTA CCTCTCCGGC TCAGGCGGCC CAGTGGGACG CTGAGACCCT GACGGTTCCA
GCAGATCCCT CCGGCACAGA GGTGACCTTC AGCGATCGCG AAATCGATTC TGGCCGCAAG
GTGTTCAACA CCAGCTGCGG CACCTGCCAC GCCGGTGGCA TCACCAAGAC CAACCACAAC
GTGGGCTTGG ATCCTGAGAC TTTGGCCCTG GCCACCCCGG CCCGCGACAA CGTTGAGGCA
CTGGTTGATT ACATGAAGGA CCCCACCTCC TACGACGGTG AATACAGCAT TGCTGACCTC
CACCCGAGCA TGCGCGACGC TGAGCTCTAT CCCGCCATGC GCGATCTTGA TGACGAGGAT
CTGCGCCTGA TGGCCGGTTA CATCCTGGTG TCCCCCAAAG TCCAAGGCAG CGCCTGGGGT
GGCGGCAAGA TCTACTTCTG A
|
|---|
| Protein sequence | MIQELGAVNA SHPLTFMASV FSSLRRSLKG LLVLIPVLIG LAVTSPAQAA QWDAETLTVP
ADPSGTEVTF SDREIDSGRK VFNTSCGTCH AGGITKTNHN VGLDPETLAL ATPARDNVEA
LVDYMKDPTS YDGEYSIADL HPSMRDAELY PAMRDLDDED LRLMAGYILV SPKVQGSAWG
GGKIYF
|
|---|
| |