| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2144 |
|---|
| Symbol | |
|---|
| ID | 3737207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1963426 |
|---|
| End bp | 1964913 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637776731 |
|---|
| Product | stage II sporulation protein D-like |
|---|
| Protein accession | YP_382438 |
|---|
| Protein GI | 78213659 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG2385] Sporulation protein and related proteins |
|---|
| TIGRFAM ID | [TIGR02669] SpoIID/LytB domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.149224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCCTCA GGACTCATGC TGCCACCTGG CTGAACCCCG GAACAGGCGG CACACTGGGA
CGCCTGTGGA TCTCCAGCGT GCGCCGCGCT TCCGTTGCCA TCGGGCTGGT GCTCGTCGCT
GTGATCGCTC CATCACCGGC TGCGCTGGCC CGCGGCCGCG AGCCGCAGAT GCGCGTGCTG
CTGCTGGAGA ACAACCGGGT CAGCCTGCGT TCCGATGGTG CACAGCCGCT GCGGGTGCAG
GGACTCCCCG GCGGAGAGCG ACGGCCGCAG CGGCTGCAGC TCAGCCTTCA AGGAACCCGC
CTGAGCGCCA CTGTGGATGG CCGATCGATG CGGCTGGCCA CCAGCACCCT GGTGACGGTG
CAGAACGACG ATCCACGGGG CATCTGGCTT GGGGAGCGTC GCTACCGCGG TGTGCTGCGC
ATCAGCAGCC GAGGCGGGCG CTTGCGGGTG ATCAACAGCC TTGGCGTTGA GACCTATCTC
AACAGTGTTG TCGGCAGCGA AATGCCTCAC CGCTGGCCCC TGGCTGCCTT GCAGGCCCAG
GCTGTGGCGG CCCGCACCTA TGCATTGAAA CAACTCAGCC GCGGTGGTGC CTGGGATGTG
AAGGCCACGG TGGCGAGTCA GGTGTATCGC GGAGTGGAGT CGGAAACCCC GAGCACACGC
AAGGCGGTGG CGAGCACCCG TTCGCTGGTG CTCGTGCACG GTGGTCGCCT GATCGATGCC
GTTTTTCACA GCAGTTCTGG CGGGGTGACC GAGGCGAGCG GGATGGTCTG GCGCCGCCAG
CATCCCTATC TGGTCAGCGT CCCCGACCAC GACCAGCACA GCCCGGTGCA CCGCTGGGAA
CAATGGTTTG ATCCTGCCGG GCTGCGTCAA CGGCTGCCCG AAACCGGTGG GCTCCAGGCC
GTTGAGGTGC TGAGTCGTTC CGGCAGCGGT CGCGTGCGCC AGGCCCGCGT GCGCGGCCCC
CGCGGATCGC TGGTGCTCAG CGGCAGTCAG CTGCGCAAAC GGTTGGGTCT CAAAAGCACG
CTGGTGAACT TTGAGATGGT GACGGGGCGG CAGCGGTCTC CCGTGGAGCT TCAAGTGCGA
CGGGTGACTG CAACCGCCCG CCCGGGCTCC CGCATCGATC GGATCACGTC ATCGGTGGCT
CGTCAGAGGG GAGCACGGCC CCCCCTGTTG GTGGCCCCTC CGCCGGTGCT GGTCAGCAAG
ACGGCGGTGC GTCGTTGGTC CGCCGGCGGC CTTCAGCTGC TGGTGAAGGG CCAGGGCTAT
GGCCATGGCG TTGGCATGAG CCAGTGGGGA GCCCACGGCC TGGCGGAGCA GGGGGCCCAC
TTCCGCTCGA TTCTTCAGCA CTACTACCGC GGGGCTGAGG TCGTTCCCTA CCGGCCGCAC
CATGACCCAT CGCTGGCGCT GAAGCCCCCA ACAAAGCCAC TCTGGAGAGA CATGCCGGTT
TCGCCCCTTG GCACGGTTTC CCTGTCATCT GCAACGCCAT TCCAGTGA
|
|---|
| Protein sequence | MLLRTHAATW LNPGTGGTLG RLWISSVRRA SVAIGLVLVA VIAPSPAALA RGREPQMRVL
LLENNRVSLR SDGAQPLRVQ GLPGGERRPQ RLQLSLQGTR LSATVDGRSM RLATSTLVTV
QNDDPRGIWL GERRYRGVLR ISSRGGRLRV INSLGVETYL NSVVGSEMPH RWPLAALQAQ
AVAARTYALK QLSRGGAWDV KATVASQVYR GVESETPSTR KAVASTRSLV LVHGGRLIDA
VFHSSSGGVT EASGMVWRRQ HPYLVSVPDH DQHSPVHRWE QWFDPAGLRQ RLPETGGLQA
VEVLSRSGSG RVRQARVRGP RGSLVLSGSQ LRKRLGLKST LVNFEMVTGR QRSPVELQVR
RVTATARPGS RIDRITSSVA RQRGARPPLL VAPPPVLVSK TAVRRWSAGG LQLLVKGQGY
GHGVGMSQWG AHGLAEQGAH FRSILQHYYR GAEVVPYRPH HDPSLALKPP TKPLWRDMPV
SPLGTVSLSS ATPFQ
|
|---|
| |