Gene Syncc9605_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2139 
Symbol 
ID3735640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1958723 
End bp1960651 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content57% 
IMG OID637776726 
ProductATPase-like protein 
Protein accessionYP_382433 
Protein GI78213654 
COG category[L] Replication, recombination and repair 
COG ID[COG3598] RecA-family ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.51863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTTA GTTCCGAACA CTTTCGTTAT CTGAAGGAGC GAGGGACCAA CCCCGAGCGA 
CTGAAGGAGC GCTACGCCTC CAAAGGCAAA GACCTTTGCA TCCTGTACTG CGACCCCAAG
GGGGAGCCGT ACAAAAACAG CAAGGGCGAG AACTACATCG TCTGCCGAAT GTTCCCCAGC
GGCAGACCGA AGTTCAAGGC ACCGTTTGAG AGTGGTTCAC GCCCGTACTT CAGCCCGTTA
ATGCCTGACG GCTATCTCGA AGACATCACC ATCCCGCTGG TGCTGATCGA GGGACCGGTC
AAGGTCGATA TCTGTTACAA GCACATCCCT GTTGGTTATT GCTTCGTCGG TCTGACAGGT
ACTTGGAACA TCGTCGATCG GCGTGGTGAT GACGGGGTCT GGAGAGAAGA CAACGACACT
CGCGTGCTCC CAGAGCTGAA GGCCATCCCG ATGAAGGGGC GGCAGGTGAT CGTCCTGCTC
GACTCCGACA TCGCCGACAA CCGATCAGTA TCTGAGGCCG CCAAGTTCAT TGCCAACTGG
GCCAGAAAGC GTGGAGCGTT CCCCCACAAG GTCACCCTGC CCAATGAGCC GGATGGTCGC
AAAAACAGCG CTGATGACTT CCTGGTGCGG CACGGTGCGC CGCAGCTAAT TGAACGGCTG
TTATCTCCAA AAGTGATCGG CTGGCCGTTG CCTGCCCCAC TTCTGACTAG TGAAGTGGAT
TTAAGAAGTG ATTACGACGC AACGGAAGAG CAGGAGCTAA TTGAGCACCT CTCGAAAATC
ACCGACATCC AACTGATGGA TTCAACGCTG CGGCGTGTTT CCAGAAAGAT CGGGCGGAAA
CACGACGAGC TACTGGCCCT TGTCGAAGAC AACCGCGCCG GTGATGAAGA TCGAGGCTTT
CTCTGCTCTG ACGAAGACCT GGAACAGTCC GACATCGATA GCAAATGGAT TGTTCCTGAT
GTCCTGCCTC GTGGTGAGTT GATCGTTATC GCTGCTGATT CCGGCGCGGG TAAATCGCTC
CTCACCTACG ACCTCTGCCG AGCGCTCATC CGTGGCGACA AATGGCTGGG GTTCAGTGTC
CCCAAGATGC GGGTGCTGAT CTTTCAGTTG GAGGAGGGGC GCACCATGGC GTCTCGACTC
ACAGCCTTTG GTTTTCATCA CTGGAGCAAG CGCGGTGAAG GCTGGGAGGC AGGGCAATCA
TTTGATCTGG CAAAGCCCCG CCACCGGCAA CAGCTCACGC GACTGATTGA GTCCGGCTAC
GACTTTGTGA TGGTGGATCC GCTGCGTGCG GTCTCCAGCC TCGACATTGA AGAGAACTGC
GCCGACATCG GAAAGAAGGT CGTTCGTCCC CTGCGCAAGC TGATCACCTC CGCCGGTGCA
TCGGCCGTCG TTATTCACCA CAACAGCCGC CATAGCGGCA AGTACGCAGG GAACGGCGAC
ATCAAAGCAG CGGTTTGGGG ACTGTTCTCG CTGCGCCGCA TCGAAGAGGG TCGGCCAGAT
GAGCTTCACC TCTCATCCCT TGAAGCTCAC GACGGCAAAT GCCGTGATGG TGACCCCATC
GTGTTGCGCA ATAGCAAAAC CCGCTGCGAG GGGTACGACG GCAGCCAGGG CAACTGTGAA
TGGAACCTTC TGGGGATGGA GCAGCACGAC TGCCCAGACC TGCCCCTGAT GAAATGGTTC
GAGGCTTTGC TTGCGCAACA GAGTGAGCCG CGCACCCTTC GTCAGATCGG TGAATCGTTG
TCCCTTCCAG CCGATGGAAC CAAGGTCAAC GGAACCCTGA GAACGATGGC GGCCAAGTCC
GCAATCATCC GCCGCTGGGC GATCAAAGAG ACGGGAAAAA CGACTATTTA TTGGATGCCC
GTTGACAGAC GACCTGATGC TTTTCAGCAA CCTCTCCCCC GTCAGGCGCT GAAAAGGATG
AAGAGTTAA
 
Protein sequence
MSLSSEHFRY LKERGTNPER LKERYASKGK DLCILYCDPK GEPYKNSKGE NYIVCRMFPS 
GRPKFKAPFE SGSRPYFSPL MPDGYLEDIT IPLVLIEGPV KVDICYKHIP VGYCFVGLTG
TWNIVDRRGD DGVWREDNDT RVLPELKAIP MKGRQVIVLL DSDIADNRSV SEAAKFIANW
ARKRGAFPHK VTLPNEPDGR KNSADDFLVR HGAPQLIERL LSPKVIGWPL PAPLLTSEVD
LRSDYDATEE QELIEHLSKI TDIQLMDSTL RRVSRKIGRK HDELLALVED NRAGDEDRGF
LCSDEDLEQS DIDSKWIVPD VLPRGELIVI AADSGAGKSL LTYDLCRALI RGDKWLGFSV
PKMRVLIFQL EEGRTMASRL TAFGFHHWSK RGEGWEAGQS FDLAKPRHRQ QLTRLIESGY
DFVMVDPLRA VSSLDIEENC ADIGKKVVRP LRKLITSAGA SAVVIHHNSR HSGKYAGNGD
IKAAVWGLFS LRRIEEGRPD ELHLSSLEAH DGKCRDGDPI VLRNSKTRCE GYDGSQGNCE
WNLLGMEQHD CPDLPLMKWF EALLAQQSEP RTLRQIGESL SLPADGTKVN GTLRTMAAKS
AIIRRWAIKE TGKTTIYWMP VDRRPDAFQQ PLPRQALKRM KS