Gene Syncc9605_2081 details

Gene Information

• Locus tag: Syncc9605_2081
• Symbol: infB
• ID: 3735812
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9605
• Kingdom: Bacteria
• Replicon accession: NC_007516
• Strand: +
• Start bp: 1902389
• End bp: 1905703
• Gene Length: 3315 bp
• Protein Length: 1104 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637776667
• Product: translation initiation factor IF-2
• Protein accession: YP_382376
• Protein GI: 78213597
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0532] Translation initiation factor 2 (IF-2; GTPase)
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00487] translation initiation factor IF-2

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCAGCA GCGGCAAAGT CAGAATTTAC GAGCTGTCCA AGGACCTCGG CCTTGAGAAC 
AAGGACGTGC TGGATGCGGC TGAAAAGCTG TCGATCGCTG CGAAGAGCCA CAGCAGCTCG 
ATCAGTGACG CTGAAGCCGG AAAGATCCGT TCGCTGCTTG GCAAGGGCGG GAATGGTGCG 
AAACCCGCTG CCGCGGCCCC CGCCAAGCCC GCACCGGGCA AGGCCATCCT CTCGGTGAAG 
AAAGCGGCCC CCGCCACCCC GAGCAAGCCC ACCCCGGCGG TGAGCAAGCC GGTTGCCAAG 
CCTGTGGCCG CTAAGCCCGT GGTCACCAAA CCCGCGGCGG CGGTCAAACC ACAGGCGGCC 
CCAAAGCCTC CCGCAGCAGC CACGCCCAAA CCGGTGATCA GCAAGCCCGC ACCGGCCCTA 
GTGAAAGCGG CGGCAGCACC GGCGCGACCA ACGGCGGCAA AGCCCGTGCC TCGGCCTGCC 
GCGGCCAAGC CTCAGGTCGT CAGCAAGCCT GCTGCAGGCA AACCGAAACT CGTAAGCAAG 
CCCAAAGCTA CTGCCAAACC CACGGCACCC ACGCCACGGC CCACACCGGC TCGCCCGACG 
CCTCGCCCTG CAGGGGCTGG AAGTCCAGCA CGGCCCACCC CCGGCCAGGG TCAGCCCAAG 
CCACAGATCA TCCGTTCTGG GGCCCCGTCT CGGCCCGGTG CTCCAACCCG TGCCGGCGCT 
CCCGCGAAAC CCGGCGCACC CTCACGCCCC ACTCCCCGGC CTGAACTGGT CGGTAAACCC 
GTCCCCCGCC GTCCTGCGGG CACCGGCGTG CCTCAACGCC AGGGGGGGCC AAGCCGTCCG 
GGAGCACCCA CCCGACAGGG TCGCCCTGGG ATGCCTCCCC GCAGCGGCAA CACCCTGGAA 
CTGGTCGGCA AGCCGATTCG TCGCGACGGC AGCACCACCG GTAGCGGTCG TCCGGGAGCA 
CCCACCCGTC CAGGAGCACC TGGACGCCCC GGAATGCCCG CTGGAATGCG CAAACCGGTG 
GCTCCCGGTG AGCTCATGCA GCTGCAGAAG CCTGTTGGCA GGCCAGCAGC ACCGGCACCC 
CGTCGTCCCG ATGCACCCAC CAAAGCCGGT GCAGGTGCAG GAACGGCCAC CCCGCCCGTG 
GCGCGTCCGA ACTCCCCCTC GGCACCGCGT CGACCCAGCT TCCGTCCGGG TGGCCCAGGT 
GGCCAACGGC GGCCTGGTCG GCCCGACTGG GATGACAGCG CCCGGCTCGA TGCTCTGCGC 
AGCCGCTCGC CGCAGAAACA GCGCCAGAAG GTGCACATCA TCGGTGAGAA CGACGACTCC 
CTGGCGGCAC AGACCGGCGG TTTCGCCGGC GAGCAGGAGA ACATGGTTCT CTCGGCGAGC 
CTTGCGCGTC CCGCCAAGCC CAAGTCGCAA CAGCGCACGG CACCCAAGCC GGTGGCGGCA 
ATGCGGAAGC GCAAGAAGGA AACCGCCCGT CAGCGTCAGC GCCGGCGTGC CATGGAGTTG 
CGAGCAGCTC GGGAAGCCAA GCAGGTGCGG CCCGAAATGA TCGTGGTGCC GGAGGACAAC 
CTCACGGTGC AGGAACTGGC AGACATGCTG AGCGTCGAAA GCTCGGAAAT CATCAAATCC 
CTTTTCTTCA AAGGGATCAT CGCCACGGTC ACCCAGACCC TAGACATGCC AACAATCGAA 
GCCGTCGCCG ACGAATTTGG TGTGCCGGTG CTGCAGGACG ACGTGGAGGA GGCGGCCAAG 
AAGACCGTCG AAATGATCGA AGAGGCCGAC AAGGCTCACC TGATCCGGCG TCCGCCCGTG 
GTCACCGTCA TGGGCCACGT CGACCACGGC AAAACCAGCC TTCTGGATGC CATCCGTCAG 
GCCCGCGTCG CTGCGGGTGA GGCCGGAGGC ATCACGCAGC ACATCGGTGC GTATCAGGTT 
GAGATCGAGC ACAACAACGA ACAGCGCAAG CTCACCTTCC TGGACACTCC GGGCCACGAA 
GCGTTCACGG CCATGCGAGC CCGCGGCACC AAGGTGACCG ACGTGGCTGT GCTGGTGGTG 
GCCGCCGATG ACGGCGTCAG GCCGCAGACC CTGGAGGCCA TCAGCCACGC CCGGGCCGCC 
GAAGTGCCGA TCGTGGTGGC GATCAACAAG ATCGATAAGG AAGGTTCATC GCCCGAACGG 
GTGAAACAGG AGCTGTCAGA GCAAAACCTG CTGGCGGAAG ACTGGGGCGG CGATGTGGTG 
ATGGTGCCGG TGAGCGCCAT CAAGGGCGAA AACATCGACA AGCTGCTGGA GATGCTGCTG 
CTGGTCACCG AAGTGGAAGA CCTGCAGGCC AACCCGGATC GTCTGGCCCG CGGCACTGTG 
ATCGAAGCTC ACCTCGACAA GGCCAAAGGC CCTGTCGCCA CACTGCTGGT GCAAAACGGC 
ACCCTCAAGA CCGGCGACGT TCTGGCCGCT GGTCCGGTGC TGGGCAAGGT GCGCGCCATG 
GTGGACGACA ACCGCCAACG GCTCAAGCAA GCTGGTCCTT CCTTTGCGGT GGAGGCCCTG 
GGCTTCAGCG AGGTGCCCAC CGCCGGTGAT GAGTTCGAGG TGTACCCCGA CGAGAAATCG 
GCCCGTGCGG TTGTGGGCGA TCGCGCCTCC GATGCCCGTG CCACCCGACT GGCTCAGCAG 
ATGGCGTCAC GACGCGTCTC GCTCACAGCC ATGTCCGGCC AGGCCAATGA CGGCGAACTC 
AAGGAACTCA ACCTGATTCT CAAAGCCGAC GTTCAGGGCT CTGTGGAAGC CATCCTCGGA 
TCGCTCGAGC AGCTGCCCAA GGATGAGGTG CAGGTGAGGG TGCTGCTCTC GGCCCCTGGC 
GAGATCACCG AAACCGACGT CGACCTGGCA GCTGCCTCGG GCGCGGTGAT CGTGGGCTTC 
AACACCTCCA TGGCCTCCGG CGCCAAGAAA GCTGCGGATG CCACCGGCGT TGACGTTCGC 
GACTACGACG TGATCTACAA GCTTCTGGAA GACATCCAGA TGGCGATGGA AGGTCTGCTG 
GAGCCGGAAC TGGTGGAGGA AGCCCTGGGC GAAGCCGAGG TGCGCGCCGT TTTCACCATC 
GGCAAGAGCG CCGTGGCCGG CTGTTATGTC ACCACCGGCA AGCTGCATCG CAACTGCCGG 
GTGCGGGTGC ACCGCGGCAA ACAGGTGGTT TACGAGGGCG ACCTCGACTC CCTGCGTCGC 
AACAAGGATG ACGTCAAGGA AGTGGCCACT GGCTTCGAAT GTGGTGTCGG CACCGATCGG 
TTCGCCAACT GGGAAGAGGG GGATCGCATT GAGGCCTTCA AGATGGTCAC CCAACGCCGC 
AAACTCACCA CCTGA 

 

Protein sequence

MTSSGKVRIY ELSKDLGLEN KDVLDAAEKL SIAAKSHSSS ISDAEAGKIR SLLGKGGNGA 
KPAAAAPAKP APGKAILSVK KAAPATPSKP TPAVSKPVAK PVAAKPVVTK PAAAVKPQAA 
PKPPAAATPK PVISKPAPAL VKAAAAPARP TAAKPVPRPA AAKPQVVSKP AAGKPKLVSK 
PKATAKPTAP TPRPTPARPT PRPAGAGSPA RPTPGQGQPK PQIIRSGAPS RPGAPTRAGA 
PAKPGAPSRP TPRPELVGKP VPRRPAGTGV PQRQGGPSRP GAPTRQGRPG MPPRSGNTLE 
LVGKPIRRDG STTGSGRPGA PTRPGAPGRP GMPAGMRKPV APGELMQLQK PVGRPAAPAP 
RRPDAPTKAG AGAGTATPPV ARPNSPSAPR RPSFRPGGPG GQRRPGRPDW DDSARLDALR 
SRSPQKQRQK VHIIGENDDS LAAQTGGFAG EQENMVLSAS LARPAKPKSQ QRTAPKPVAA 
MRKRKKETAR QRQRRRAMEL RAAREAKQVR PEMIVVPEDN LTVQELADML SVESSEIIKS 
LFFKGIIATV TQTLDMPTIE AVADEFGVPV LQDDVEEAAK KTVEMIEEAD KAHLIRRPPV 
VTVMGHVDHG KTSLLDAIRQ ARVAAGEAGG ITQHIGAYQV EIEHNNEQRK LTFLDTPGHE 
AFTAMRARGT KVTDVAVLVV AADDGVRPQT LEAISHARAA EVPIVVAINK IDKEGSSPER 
VKQELSEQNL LAEDWGGDVV MVPVSAIKGE NIDKLLEMLL LVTEVEDLQA NPDRLARGTV 
IEAHLDKAKG PVATLLVQNG TLKTGDVLAA GPVLGKVRAM VDDNRQRLKQ AGPSFAVEAL 
GFSEVPTAGD EFEVYPDEKS ARAVVGDRAS DARATRLAQQ MASRRVSLTA MSGQANDGEL 
KELNLILKAD VQGSVEAILG SLEQLPKDEV QVRVLLSAPG EITETDVDLA AASGAVIVGF 
NTSMASGAKK AADATGVDVR DYDVIYKLLE DIQMAMEGLL EPELVEEALG EAEVRAVFTI 
GKSAVAGCYV TTGKLHRNCR VRVHRGKQVV YEGDLDSLRR NKDDVKEVAT GFECGVGTDR 
FANWEEGDRI EAFKMVTQRR KLTT