| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2079 |
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| Symbol | nusA |
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| ID | 3735810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 1900599 |
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| End bp | 1902044 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637776665 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_382374 |
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| Protein GI | 78213595 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.376983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTCG TCCTGCTTCC CGGTCTCAGC AACCTGATCG ACGACATCAG TGAAGAGAAG
AAGCTGCCGC CTCAGGTGGT GGAAGCGGCC CTGCGGGAGG CCCTGCTGAA GGGCTATGAG
CGCTACAGGC GCACCCTGTA TCTCGGCATC AGCGAAGACC CCTTTGATGA GGAGTACTTC
AGCAACTTTG ACGTTGGCCT CGACCTGGAG GAGGAGGGCT ACAGGGTTCT CGCCAGCAAG
ATCATTGTTG ATGAGGTGGA GAGCGAAGAC CACCAGATCG CGATCGCCGA GGTGATGCAG
GTGGCCGATG ACGCCCAGGT GGGCGACACG GTGGTGCTGG ATGTCACCCC TGAGAAAGAG
GATTTCGGCC GCATGGCCGC CGCCACCACC AAGCAGGTGC TGGCCCAGAA GCTGCGGGAT
CAGCAGCGCC GCATGATCCA GGAGGAGTTC GCTGATCTGG AGGATCCGGT GCTGACGGCC
CGGGTGATCC GCTTCGAACG GCAGTCGGTG ATCATGGCGG TCAGCTCAGG CCTGGGCCGT
CCGGAAGTGG AGGCGGAGCT GCCCCGGCGC GATCAGCTGC CCAACGACAA CTACCGCGCC
AATGCCACCT TCAAGGTCTT CCTGAAAGAG GTGAGCGAAG TGCCCCGCCG GGGACCGCAG
CTGTTCGTCA GCCGCTCCAA TGCTGGGCTG GTGGTGTATC TGTTCGAGAA CGAAGTTCCC
GAAATCCAGG AAGGATCCGT TCGGATCGTG GCCGTGGCCC GTGAAGCCAA TCCCCCCTCC
CGTTCCGTGG GCCCCCGCAC CAAGGTGGCC GTCGACAGCA TTGAACGCGA GGTGGACCCG
GTCGGCGCCT GCATCGGCGC CCGCGGCTCC CGCATCCAAC AGGTGGTGAA CGAACTGCGT
GGAGAAAAAA TCGACGTGAT CCGCTGGTCC CAGGATCCGG GCCAATACAT CGCCAATTCC
CTCAGCCCCG CTCGGGTGGA AATGGTGCGT CTGGTGGATC CCGTGGGCCA GCACGCCCAT
GTGCTGGTGC CCCCCGATCA GCTGAGCCTG GCCATCGGCC GCGAGGGCCA GAACGTGCGT
TTGGCCGCCC GACTCACCGG CTGGAAGATC GACATCAAGA ACTCCACCGA ATACGACCAA
GAGGCCGAGG ATGCCGTGGT GGCGGAGCTG ATCTCCCAGC GGGAGGAAGA GGAAGCGCTC
CAGCAGCAAG CCGAGGAACG GCTGGCCGCC GAACAGGCCG CTCGGGCGGA AGAGGATGCA
CGCCTGCGGG AGCTGTATCC GCTGCCCGAA GACGAAGAGG AGTACGGCGA GGAGCAGCCC
GAGCAGGAGT TCTCTGAGGA GGAGCCCGCT GAGGTGGAAG CCGGCACCGA GTCCGAGACC
GAAGCCACGG ATGCAGCGGT TGAAGCCGAT GCGGATGCCG ATCCCGATCA GGAGCAGGTC
CGGTGA
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| Protein sequence | MALVLLPGLS NLIDDISEEK KLPPQVVEAA LREALLKGYE RYRRTLYLGI SEDPFDEEYF
SNFDVGLDLE EEGYRVLASK IIVDEVESED HQIAIAEVMQ VADDAQVGDT VVLDVTPEKE
DFGRMAAATT KQVLAQKLRD QQRRMIQEEF ADLEDPVLTA RVIRFERQSV IMAVSSGLGR
PEVEAELPRR DQLPNDNYRA NATFKVFLKE VSEVPRRGPQ LFVSRSNAGL VVYLFENEVP
EIQEGSVRIV AVAREANPPS RSVGPRTKVA VDSIEREVDP VGACIGARGS RIQQVVNELR
GEKIDVIRWS QDPGQYIANS LSPARVEMVR LVDPVGQHAH VLVPPDQLSL AIGREGQNVR
LAARLTGWKI DIKNSTEYDQ EAEDAVVAEL ISQREEEEAL QQQAEERLAA EQAARAEEDA
RLRELYPLPE DEEEYGEEQP EQEFSEEEPA EVEAGTESET EATDAAVEAD ADADPDQEQV
R
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