Gene Syncc9605_2072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2072 
Symbol 
ID3735803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1895442 
End bp1896542 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content65% 
IMG OID637776658 
ProductPDZ/DHR/GLGF 
Protein accessionYP_382367 
Protein GI78213588 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGTACG CCCTGCGTCA ACTCCTGGCC GTTCTGATGG CTGTAGCGGT CCTGGTCGGT 
GAAGGTGCCT CAGCGCAGGC CCTGGAGCAC AGCTTTGTGG CCGATGCCGT TCAGCGGGTT
GCTCCGGCGG TGGTTCGGAT CGACACCGAG CGCACCGTGG AACGTCAGCC GTTTGACCCC
ACGCTGCTTG ATCCCCTGCT GCGGGACCTT CTGGGGGATC CTCCAGCTGG CCCGGAGCGG
GAACGGGGCC AAGGCTCTGG TGTGGTGATC GATGCCAAGG GCCTTGTGCT CACCAATGCC
CATGTGGTGG ATCGGGTTGA GTCCGTCAGC GTCACCCTGG CCGACGGAGA ACAGCGGGAT
GGACGGGTGG TGGGCACCGA TGCGGTGACA GACCTGGCCC TGGTGCGTCT CGAGGGCGAT
CAACTGCCGC CACGGGCTCC CTTGGGTGAT TCGGAAGCCA TGCAGGTGGG CGATTGGGCG
ATCGCCCTCG GCACTCCATT CGGATTGGAA CGCACGGTGA CCCTGGGCAT CGTCAGCAGC
CTGCACCGCA ACATCAACAG TCTTGGCTTC GCCGACAAAC GGCTGGAACT GATTCAGACT
GACGCTGCTA TCAACCCCGG CAATTCCGGA GGGCCGTTGG TGAACGGCGA TGGCCAGGTG
ATTGGCATCA ACACATTGGT GCGGTCGGGA CCTGGGGCCG GCCTCGGTTT TGCCATCCCG
ATCAACCTGG CCCGCCGAGT GGCGGATCAG CTCCAGCAGC AGGGTGAGGT GGTGCATCCT
TACATCGGTC TGCAACTGGT GGCGCTCACA CCGCGTATCG CGCGCGAGCA CAACAAGGAC
CCCAATGCCC TGGTGCAGCT GCCGGAACGC AGCGGTGCCC TGGTGCAAGC CGTGCTTCCC
GATGGCCCGG CCGAAAAAGC AGGACTGCGC CGCGGCGATC TGTTGATCAC GGTGGATGAG
CGCGAGATTG CTGACCCTCA GGCGCTGCTC GAGGTGGTGG ATGCCGCCGC CATCGATGTT
CCACTGCCTC TGAAGGTGCT GCGGGCGGGC CGCGAGCTGA CCCTGTCCGT CAAACCTGAG
CCCCTGCCTG GGATGGCCTG A
 
Protein sequence
MRYALRQLLA VLMAVAVLVG EGASAQALEH SFVADAVQRV APAVVRIDTE RTVERQPFDP 
TLLDPLLRDL LGDPPAGPER ERGQGSGVVI DAKGLVLTNA HVVDRVESVS VTLADGEQRD
GRVVGTDAVT DLALVRLEGD QLPPRAPLGD SEAMQVGDWA IALGTPFGLE RTVTLGIVSS
LHRNINSLGF ADKRLELIQT DAAINPGNSG GPLVNGDGQV IGINTLVRSG PGAGLGFAIP
INLARRVADQ LQQQGEVVHP YIGLQLVALT PRIAREHNKD PNALVQLPER SGALVQAVLP
DGPAEKAGLR RGDLLITVDE REIADPQALL EVVDAAAIDV PLPLKVLRAG RELTLSVKPE
PLPGMA