Gene Syncc9605_2071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2071 
Symbol 
ID3735802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1894684 
End bp1895403 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content62% 
IMG OID637776657 
Productribose-5-phosphate isomerase A 
Protein accessionYP_382366 
Protein GI78213587 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC TACAGACCCA GATGAAGCAG GCGGTGGCTG ATGCCGCCGT GGAACAGATC 
AAGGACGGCA TGGTTCTGGG CCTGGGGTCA GGCTCCACCG CCGCCCTGAT GATTCAGGGC
CTGGGGGCCA AGCTCGCCAG CGGAGAACTC AAAGACATCG TCGGTGTTAC CACCTCTTTC
CAGGGAGAGG TGCTGGCCGC TGAGCTCAAC ATCCCCCTGC TCAGCCTCAA CGCCGTCAGC
CGGATTGATC TGGCCATCGA TGGTGCTGAC GAAGTCGACC CTGGCTTCCA ATTGATCAAG
GGCGGTGGCG CTTGCCACGT GCAGGAAAAA CTCGTGGCGG CACGGGCGGA TCGTTTTGTA
GTGGTGGTGG ACTCCACCAA ACTGGTGGAC CGTCTCAACC TCGGTTTTCT GCTGCCGGTG
GAAGTGCTAC CCGGGGCCTG GCGCCAGGTG AAGCAGCAGC TGGAAGCTCT CGGGGGCAGT
GCTGAGCTCC GAATGGCCCA GCGCAAGGCA GGCCCTGTGG TCACCGATCA GGGCAACCTG
GTGCTGGACG CCAAGCTCGA TGGCGGCATC AGCGATCCAG TGGCCCTGGA GCAGACGATC
AACAACATTC CAGGTGTGCT GGAGAACGGC CTGTTCGTCA ACATCACCGA TGAGGTGTTG
GTCGGTGAAA TCACTGATGG CGTTGCGGGT GTCCGCAGTC TGCAGAAGCG CCTCAGCTGA
 
Protein sequence
MADLQTQMKQ AVADAAVEQI KDGMVLGLGS GSTAALMIQG LGAKLASGEL KDIVGVTTSF 
QGEVLAAELN IPLLSLNAVS RIDLAIDGAD EVDPGFQLIK GGGACHVQEK LVAARADRFV
VVVDSTKLVD RLNLGFLLPV EVLPGAWRQV KQQLEALGGS AELRMAQRKA GPVVTDQGNL
VLDAKLDGGI SDPVALEQTI NNIPGVLENG LFVNITDEVL VGEITDGVAG VRSLQKRLS