Gene Syncc9605_2070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2070 
SymbolhisD 
ID3735801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1893384 
End bp1894691 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content67% 
IMG OID637776656 
Producthistidinol dehydrogenase 
Protein accessionYP_382365 
Protein GI78213586 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCAGC CGGCCGTTGC TCCCCTTCGC ATCGTGCGGG ATCTGGACCG GGCCCAGACG 
GAGCTGAAAC GGTTGTCGAG CCGCACCACG CAAACCCAGC AGGGTGAAGC CCGTGAGCGG
GTTGAATCCA TTCTCGCAGC GGTGCGCGAC CGCGGTGATG CCGCCATTGC CGACTACACC
GAACGGTTCG ATGGCTTCCG GCCCGAACCG ATGGCGGTGT CGCCCGAGGC CCTCGAACAG
GCCTGGACGT CGCTGCCGAC CAACCTGCGG GATGCCCTAG AGCTGGCCCA TCGCCGCATC
ACCGACTTCC ACCAACGCCA ACGTCCCGCC GATCTGGCGG TGACGGGCCC CCATGGCGAA
CAGCTTGGGC GGCGCTGGCG ACCGGTGGAG CGGGCGGGTC TCTACGTGCC CGGAGGACGG
GCGGCCTACC CCAGCACCGT GTTGATGAAT GCTGTTCCAG CCCGGGTCGC CGGCGTCAAA
AACGTGGTGA TCTGTTCCCC CGCTGGACGT GATGGTGCGG TGAACCCCGT GGTACTGGCA
GCGGCCCACC TGGCCGGCGT GAAAACGGTG TTCCGCCTCG GAGGTGCCCA AGCTGTCGCC
GCCATGGCCT ATGGCAGCGA GAGCGTTCCC AAGGTGGACG TGATCAGTGG CCCCGGGAAC
CTCTACGTCA CCCTGGCGAA ACAGGCGGTG TACGGCCAGG TGGCCATCGA TTCCCTGGCG
GGACCAAGCG AAGTGCTGGT GATCGCAGAC CACTCCGCCA AGCCCGATCA GGTGGCAGCG
GATCTGTTGG CGCAGGCGGA GCACGACCCC CTGGCGGCTG CGGTGCTGAT CACCACCGAC
CCTGCACTGG CCGACGGGAT CAACGCCGCA GTGGCCGAAC AGCTGGCCGA TCACCCCCGC
CAGGAGATCT GCGAAGCCGC TTTGCGGGAC TGGGGGCTGG TGGTGGTCTG CGACGACCTT
GAAAGCTGTG CCCGCCTCAG CGACAGCTTC GCTCCCGAAC ACTTAGAGCT GCTGGTGGAG
CGGCCCGAGC CCCTGGCGGA TCGCATTCAG AACGCCGGAG CCATTTTCCT AGGCCCCTGG
TCTCCAGAAG CCGTGGGGGA TTACCTGGCA GGCCCGAACC ACACGCTGCC CACCTGTGGA
GCCGCGCGTT TCAGCGGAGC CCTGAGTGTT GAGACCTTCA TGCGCCACAC CTCGCTGATC
GGTTTCAACC GGGCTGCCCT AGAAGCAACG GGTTCAGCTG TGCAGGAGCT GGCCACCAGT
GAAGGCCTGC ACAGCCACGC TGAGTCGGTG CGGCGGCGCC TCAGCTGA
 
Protein sequence
MSQPAVAPLR IVRDLDRAQT ELKRLSSRTT QTQQGEARER VESILAAVRD RGDAAIADYT 
ERFDGFRPEP MAVSPEALEQ AWTSLPTNLR DALELAHRRI TDFHQRQRPA DLAVTGPHGE
QLGRRWRPVE RAGLYVPGGR AAYPSTVLMN AVPARVAGVK NVVICSPAGR DGAVNPVVLA
AAHLAGVKTV FRLGGAQAVA AMAYGSESVP KVDVISGPGN LYVTLAKQAV YGQVAIDSLA
GPSEVLVIAD HSAKPDQVAA DLLAQAEHDP LAAAVLITTD PALADGINAA VAEQLADHPR
QEICEAALRD WGLVVVCDDL ESCARLSDSF APEHLELLVE RPEPLADRIQ NAGAIFLGPW
SPEAVGDYLA GPNHTLPTCG AARFSGALSV ETFMRHTSLI GFNRAALEAT GSAVQELATS
EGLHSHAESV RRRLS