| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2042 |
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| Symbol | |
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| ID | 3737718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 1863063 |
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| End bp | 1865837 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637776628 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_382337 |
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| Protein GI | 78213558 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAT CGACACCGGC CACGCCCCGA TCCGAGCCCG ATGTCGATCG CAGTGCCCCA
CTGAATCCCT CGGAAATCTT TCCCTTCCCG CTGGATGATT TCCAGCTGGA GGCCATGGAT
GCCCTCAACC AGGGACATTC GGTCGTGGTG AGTGCGCCCA CAGGATCCGG CAAAACCCTG
ATCGGTGAAT ACGCCATTCA TCGTGCTCTG GCCCACGACC AGAAGGTCTT TTACACCACG
CCGCTGAAGG CTCTGTCCAA CCAGAAGCTG CGTGATTTCC GCGATCAGTT CGGTGCCGAG
AACGTGGGGT TGATGACCGG TGACCTCAGC GTGAATCGCG AGGCCTCCAT CGTTGTGATG
ACCACGGAGA TCTTCCGAAA CATGCTCTAC GCCGAGGCGG ATGAGCACGA CGATCCCCTG
ACTGATGTGG AAGCGGTGGT GCTCGATGAG TGTCACTACA TGAACGATTC CCAACGCGGC
ACGGTCTGGG AGGAGTCGAT CATTCACTCC CCACCCACGG TGCAGCTGGT CGCGCTCTCC
GCCACCGTGG CCAATGCAGG TCAGCTGACC GACTGGATCG ATAAGGTCCA TGGTCCGACC
ACCTTGGTGA TGAGTGACCA CCGGCCGGTG CCACTGCAGT TCAGCTTCTG CAGCGCCAAG
GGGCTGCACC CACTGCTCAA CGATGCCGGC ACGGGATTGC ATCCCAACTG CAAGGTCTGG
CGCGCTCCCA AAGGGCACAA GCGCAAAGGG CGTTCCCAGA GACCGACGCA GCCGGAACCA
CCACCAATCA CCTTTGTTGT GGCCCAGATG GCCGAGCGGC AGATGCTCCC TGGCATCTAT
TTCATCTTCA GTCGCCGTGG CTGCGACAAG GCGGTTCGGG ATCTGGGGGT GCAGTGTCTG
GTCAGCAAGC AGGAGCAGGC GCGGATCAAG GCGCGCTTGA CGGCCTACAG CAACGACAAC
CCCGAGGCTG TGCGGGATGG AATCCACGCC GACGCTCTGC TGCGGGGCAT CGCTGCCCAC
CACGCTGGTG TTCTTCCGGC CTGGAAGGAG TTGATCGAGG AGCTGTTCCA GCAGGGACTG
GTGAAAGTGG TCTTTGCGAC CGAGACCCTT GCGGCCGGCA TCAACATGCC GGCCCGCAGC
ACTGTGATCG CGGCCATGTC CAAGCGCACC GAGCGGGGGC ATCGCCCGCT CATGGGCAGT
GAGTTCCTGC AGATGGCCGG CCGGGCCGGG CGGCGTGGTC TCGACTCTCA GGGCTACGTC
GTGACGGTGC AGAGCCGGTT CGAAGGTGTG CGTGAAGCCG GTCAGCTGGC GACGAGTCCC
TCCGACCCAC TGGTGAGCCA GTTCACCCCC AGCTACGGCA TGGTTCTCAA CCTGCTGCAG
CGCCACGATC TGGCCAAGGC CAGGGAGTTG GTGGAGCGCA GTTTTGGCCG ATATCTGGCG
GGGCTGGACC TCGTGGAGGA CGAAGACAAC CTCTCCCAGC TGCGGTTGCA ACTCAGCCAG
CTAGAGGGCG TTGCCGGCGA CATCCCCTGG GAAGACTTTG AGGATTACGA AAAAATGCGT
GGGCGGCTCC GCGAAGAGCG GCGCTTGCTC CGCATCCTTC AGCAGCAGGC CGAGGAGACG
CTGGCCAACG AGCTGACGAT GGCCCTGCAG TTCGCCAGCA CCGGCACCCT GGTCAGCCTC
AAATCCCCGC AGCTGCGGGG GCGCGTCGCG CCCGCGGTTA TCGTCGAGAA GGTGAAGGGG
CCTGGTCAGT TCCCGCTGCT GCTCTGCCTG ACCGATGAAA ACGTCTGGAT CCTGGTGCCC
TGTCAGGCGG TGGTGAGCAT CCATGCGGAG CTCAGTTGCC TGCAGGTGGA TGGGCTCGAG
GTCCCGGAGC TGTCCCGCTC CGGTGAGTTG CGCCATGGCG ATCAGGCCAG TGGTGGTTTG
GCGTTAGCCG TGGCCCACAT GGCCCGGCGC CATGACATGA CCACCCCGCA ATACGACCTG
GCTGGGGAGG TGTTGACCCA GGCCCGGCTG GTGCGGGATC TCGAACAGGA GCAGGAGCAG
CATCCGGCCC ATCGCTGGGG AGATCGCAAA CAGCTGAAGA AGCACCGCCG TCGCATGGAA
GATCTGGAGC TGGAGATCGC TGAACGGCAG CAGCAGCTGC ATCAGCGGGC CAACCGCCAC
TGGGAAACCT TCCTGGCCTT GATGGATATC CTGCAGCACT TCGGATGTCT CGATGAGCTG
GATCCCACGG AGATCGGCCG CACCGTTGCT GCCTTGCGGG GCGACAACGA ACTCTGGCTC
GGGCTGGCGC TGATGAGTGG CCATCTCGAT GACCTCTCCC CCCCCGACCT GGCGGCGGTG
TTCGAGGCGA TCAGCACCGA GGTGAACCGC CCCGACCTGT GGAGTGGCTT CCCGCCACCT
GCTGCAGCGG AGGAAGCCCT GCAGGATCTT TCGGGTCTGC GTCGCGAGCT GCTGCGGGCC
CAGGAACGCG CCGGTGTGGT GGTGCCGGCC TGGTGGGAAC CTGAGCTTAT GGGCCTTGTG
GATGCCTGGG CGCGGGGAAC GTCCTGGAGC GATCTGATCG CCAACACCTC CCTGGACGAG
GGCGATGTGG TTCGGATCAT GCGCCGCACC GTGGACCTCC TTGCCCAGGT GCCCTACTGC
GAAGCAATTA GCGAGCAACT GCGCAGCCAT GCCCGTCAGG CGCTGAAAGC GATCAACCGC
TTCCCCGTGG CTGAAGCCGA GGATCTGGTG CCGGCCTCCG CTGCGCTGAA CCCGGCAACG
GAGCGGGCGG CATGA
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| Protein sequence | MNQSTPATPR SEPDVDRSAP LNPSEIFPFP LDDFQLEAMD ALNQGHSVVV SAPTGSGKTL
IGEYAIHRAL AHDQKVFYTT PLKALSNQKL RDFRDQFGAE NVGLMTGDLS VNREASIVVM
TTEIFRNMLY AEADEHDDPL TDVEAVVLDE CHYMNDSQRG TVWEESIIHS PPTVQLVALS
ATVANAGQLT DWIDKVHGPT TLVMSDHRPV PLQFSFCSAK GLHPLLNDAG TGLHPNCKVW
RAPKGHKRKG RSQRPTQPEP PPITFVVAQM AERQMLPGIY FIFSRRGCDK AVRDLGVQCL
VSKQEQARIK ARLTAYSNDN PEAVRDGIHA DALLRGIAAH HAGVLPAWKE LIEELFQQGL
VKVVFATETL AAGINMPARS TVIAAMSKRT ERGHRPLMGS EFLQMAGRAG RRGLDSQGYV
VTVQSRFEGV REAGQLATSP SDPLVSQFTP SYGMVLNLLQ RHDLAKAREL VERSFGRYLA
GLDLVEDEDN LSQLRLQLSQ LEGVAGDIPW EDFEDYEKMR GRLREERRLL RILQQQAEET
LANELTMALQ FASTGTLVSL KSPQLRGRVA PAVIVEKVKG PGQFPLLLCL TDENVWILVP
CQAVVSIHAE LSCLQVDGLE VPELSRSGEL RHGDQASGGL ALAVAHMARR HDMTTPQYDL
AGEVLTQARL VRDLEQEQEQ HPAHRWGDRK QLKKHRRRME DLELEIAERQ QQLHQRANRH
WETFLALMDI LQHFGCLDEL DPTEIGRTVA ALRGDNELWL GLALMSGHLD DLSPPDLAAV
FEAISTEVNR PDLWSGFPPP AAAEEALQDL SGLRRELLRA QERAGVVVPA WWEPELMGLV
DAWARGTSWS DLIANTSLDE GDVVRIMRRT VDLLAQVPYC EAISEQLRSH ARQALKAINR
FPVAEAEDLV PASAALNPAT ERAA
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