Gene Syncc9605_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2017 
Symbol 
ID3736646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1836913 
End bp1838082 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content65% 
IMG OID637776603 
Productglycosyltransferase 
Protein accessionYP_382313 
Protein GI78213534 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.641598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCAGA TCGCGTGGCT CGGCAAGAAG TCTCCCTTCT GCGGGAATGT GTCCTACGGG 
ATCAGCACCA CAGAGGCCCT GCGCAAACGC GGGCATCAGG TGCACTTCAT CCATTTCGAT
AACCCGCGCA GCCCGGAGCG CGACAACACA TCGCTGCTGG CCAACGACCC GGACGTCAGC
CTGCCCTATC TGGTCAAATC GCAGGTCTAC ACGATCCCTT CCCCCGGAGC GCAGCGGGAG
CTGAGGGAAT CCCTAGAGCG GCTGCAGCCC GATCTCGTGC ACGCCAGCCT CACCCTTTCG
CCCCTGGATT TCCGCCTGCC GGAGCTCTGT CAGCAGCTGG GCGTGCCCCT GGTAGCCACC
TTTCATCCCC CCTTCGATGC AGGCCTTCGC AACCTGACGG CGGGCACCCA ACAGCTCACA
TACCAGCTTT ATGCACCGGC CCTGGCCCGC TACGACCGGG TGATCGTGTT TTCACAGCTG
CAGGCGGATT TTCTTGAGCG CCTCGGCGTT CCAGCCGATC GTCTGACGGT TATTCCCAAT
GGTGTGGACA CCGACCGCTG GTGCCCCACC AGCCCCGGCA CCCTTTCGCT GATGCATCAG
CAGGTGCGGC AACGGCTGGG CCGAGAACGG ATCGTGCTCT ACATGGGGCG CCTGGCGACG
GAGAAAAACG TTGAAGCCCT GCTGCGGGCC TGGCGTCTGG TCTCACCGAA GGGCTGCCGT
TTGGTGATCG TCGGCGACGG GCCGCTGCGC AACAGTCTGA TGAACCAATT CAACGACGAT
CGGATCCTCT GGTGGGGCCA CGAGCCAGAC CTGGACACCC GGGTTGCACT GCTCCAGTGC
GCTGAGGTCT TCATCCTGCC GAGCCTTGTG GAGGGCCTGT CGCTAGCCTT GCTGGAGGCG
ATGGCCAGCG GAACAGCATG CGTGGCCACC GACGCCGGTG CCGATGGCGA GGTGCTCGAG
CAAGGGGCGG GAATCGTGCT GAGCACCCAG GGCGTCACCA CCCAGTTGCG CACGCTGCTG
CCGGTGCTTA GGGACCAGCC GGTGCTGACG GCGGAACTGG GCCGCAAAGC CCGCCTACGC
GCCCTGGAGC GCTACACGAT CTCAAGCAAC ATCGACGCCC TCGAACAGCT CTACGCCGAC
CTGATGCTGA CCAGCACGGT CGCCGCATGA
 
Protein sequence
MAQIAWLGKK SPFCGNVSYG ISTTEALRKR GHQVHFIHFD NPRSPERDNT SLLANDPDVS 
LPYLVKSQVY TIPSPGAQRE LRESLERLQP DLVHASLTLS PLDFRLPELC QQLGVPLVAT
FHPPFDAGLR NLTAGTQQLT YQLYAPALAR YDRVIVFSQL QADFLERLGV PADRLTVIPN
GVDTDRWCPT SPGTLSLMHQ QVRQRLGRER IVLYMGRLAT EKNVEALLRA WRLVSPKGCR
LVIVGDGPLR NSLMNQFNDD RILWWGHEPD LDTRVALLQC AEVFILPSLV EGLSLALLEA
MASGTACVAT DAGADGEVLE QGAGIVLSTQ GVTTQLRTLL PVLRDQPVLT AELGRKARLR
ALERYTISSN IDALEQLYAD LMLTSTVAA