Gene Syncc9605_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1998 
Symbol 
ID3737446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1816751 
End bp1817353 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content45% 
IMG OID637776584 
Producthypothetical protein 
Protein accessionYP_382294 
Protein GI78213515 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.579109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0445396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGGT TTACGACTGC TTTTGCGACC GTAGCCCTGG CAGGCATCGG AGATAAATCA 
TTTTTAACCG CTCTTGCTTT AGCAGCACGC CACAAAGCTC GTTGGGTTTT TATTGGAAGC
GTGTCTGCAC TCACAGTCGG AGCGGGCCTT TGGATCGGGA TGGGTGCATG GCTAAATACA
TTAGTTTCAA CAGAAACAGT CAAATTTGTA TCCGGTATTA CATTTTTAGC ATTTGGAGCA
TTAGCTCTGA GTCAGGTCTA TCAATGCCAT TCAAATCCTG AGATTGACGC AAAATTAACA
TCGGATAAAT TAATGTGTGA TGTGAGAGAC CAAGGGGCCG AAATTGTCAT TCGCAACTCA
TTTACAACAA CCTTCTTGGC CGAATTCGGG GATCGCACTC AGCTAGCCCT ATTAGCGCTA
GCGGCAGGTC CGAACATTTC TGCCTCAAGC ATTTTTACTG GAGCAGTTGC AGCCAATTTC
TTGCTCGTTA TTGCAGCTGT TTCGTCAGGA AAACTCTTGA GGAACCATCT AAGCTACAAA
AAATTATCTT TTTGCAGCGG TATTCTTTTT CTAGCGCTCG GCGTCAGAAT TCTTGCAACG
TAA
 
Protein sequence
MAGFTTAFAT VALAGIGDKS FLTALALAAR HKARWVFIGS VSALTVGAGL WIGMGAWLNT 
LVSTETVKFV SGITFLAFGA LALSQVYQCH SNPEIDAKLT SDKLMCDVRD QGAEIVIRNS
FTTTFLAEFG DRTQLALLAL AAGPNISASS IFTGAVAANF LLVIAAVSSG KLLRNHLSYK
KLSFCSGILF LALGVRILAT