| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1970 |
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| Symbol | |
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| ID | 3736367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 1791242 |
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| End bp | 1792489 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637776555 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_382266 |
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| Protein GI | 78213487 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.660079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.50085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCA TCAGCGTGCT GGGATCCACC GGTTCGATCG GCACCCAGAC CCTCCAGATC
GCTGAGGAGT TTCCGGAGCA GTTCCGCGTT GTAGCCCTCA CGGCCGGCCG CAACCTGAAG
CTTTTGGTTG AACAAGTTCA GAGGCATCGC CCTGAGGTGG TGGCCCTGGC GGATTCCGAT
CTCCTGCCTG AACTGCAGGA GCGGCTGAAG GATGCCGGCG TCACAGGCGC CGATGCACCC
CAGTTGGTGG GAGGTGCTGA CGGTCTCAAC GTTGCTGCCG CCTGGGACAG CGCCGACCTG
GTGGTGACGG GCATTGTTGG TTGCGCCGGT CTGTTGCCGA CCCTGGCGGC GATCCGCGCT
GGCAAGGACC TCGCTCTGGC GAACAAGGAA ACCCTGATTG CGGCCGGCCC CGTGGTGCTG
CCGGAACTGA AGAAGAGCGG CAGCCGTCTG CTGCCGGCGG ATTCGGAACA CTCAGCCATT
TTCCAGTGCC TGCAGGGAAC CCCCTGGGCT GAAAACGCAC GGCTCTCCAC CGGCGTACCC
ACACCGGGGC TGCGCCGGAT TCAGCTCACA GCCTCCGGCG GCGCATTCCG CGACTGGACG
GCCGCCGACC TTGAGAAGGC CACCGTGGCC GATGCCACCA GTCATCCCAA CTGGAGCATG
GGCCGCAAGA TCACCGTGGA TTCCGCCTCC TTGATGAACA AGGGGCTGGA GGTAATCGAA
GCCCACTACC TGTTCGGCCT GGATTACGAC CACATCGAGA TCGTGATCCA TCCCCAGAGC
ATCATCCATT CGATGATCGA ACTGGCGGAT TCGTCCGTGC TGGCCCAACT GGGCTGGCCC
GACATGAAGC TGCCAATCCT TTACTGCCTC AGCTGGCCCT CACGCCTGGA GACGCCATGG
CGGCGACTGG ATCTCACGGA AGTGGGTCAG CTCAGCTTCC GGGCCCCCGA TCCCGCCAAG
TACCCCTGCA TGGAGCTGGC CTACGCCGCT GGAAGCGCCG GCGGCACCAT GCCCGCAGTA
ATGAATGCTG CCAACGAGGA AGCTGTGGCG CAGTTCCTCG AGGAAAAGAT TCACTTCCTC
GACATCCCCA CAGTGATCGA GGCCGCCTGC GAGCGCCATA AACCCGATCT GATGGCCCAG
CCCCAGTTGG ACGACGTGCT GCGGGTGGAT CAGTGGGCGC GAACCGCCGT GCGGGAACAG
GTGAACCGCG GTGTGACCCG TCTGCCCATG GGAGCCATCG CCGCTTAG
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| Protein sequence | MKAISVLGST GSIGTQTLQI AEEFPEQFRV VALTAGRNLK LLVEQVQRHR PEVVALADSD
LLPELQERLK DAGVTGADAP QLVGGADGLN VAAAWDSADL VVTGIVGCAG LLPTLAAIRA
GKDLALANKE TLIAAGPVVL PELKKSGSRL LPADSEHSAI FQCLQGTPWA ENARLSTGVP
TPGLRRIQLT ASGGAFRDWT AADLEKATVA DATSHPNWSM GRKITVDSAS LMNKGLEVIE
AHYLFGLDYD HIEIVIHPQS IIHSMIELAD SSVLAQLGWP DMKLPILYCL SWPSRLETPW
RRLDLTEVGQ LSFRAPDPAK YPCMELAYAA GSAGGTMPAV MNAANEEAVA QFLEEKIHFL
DIPTVIEAAC ERHKPDLMAQ PQLDDVLRVD QWARTAVREQ VNRGVTRLPM GAIAA
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