Gene Syncc9605_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1950 
Symbol 
ID3736618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1768985 
End bp1770130 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content64% 
IMG OID637776535 
Productbeta-lactamase family protein 
Protein accessionYP_382246 
Protein GI78213467 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAGCA GTCGTTCGTC ACGTCGCTCC GCCGGCTGGA AAGGTCCAGC CCAGCTCATC 
CTGCGGCTGA TGTTGATGGG GGTGGGCCTT GGACTGCTCA CCGGCAGCGG CCTGCGGCTA
CTGGCGCCCC GCGTTCAGCA ACAGGAGATC GCACTGCCCA GCTGGCTGGC CGATCAGGCG
CTGATCACCA CGCTGCTCGG TGACGCCGTG GAGCCGCCCA GTACTGAAAA CGCCACTGGG
AATAAAACTG CATCTGTCGT AGCGAAGGGA CTGAAGCAGG CACGCTTCGC CCCAAGACAG
GAAATCAGGG CGCTGTCGGA ACGCTGGCTG GAGCTGGCCG CGCAACAGAG CAATCTGCAG
GCCAGCGCCT ACATGCTGAT TCTTGACGAC GGGCGCTTTG CAGCCATGCA GGCCGAACGG
CCGATGGCTG CCGCCAGCTC GATCAAGACG CCGATCCTGC TTGCAGTGCT GGAACTGCTG
GATCAGGGAA CACTGCAATG GAACGAACCG CTCACTCTCA CCGAGGAGCT GGTGGGGGGA
GGCGCCGGTT GGATGGCCTC TCGGCCCCTG GGCAGCCGCT TTCCCACCCA TGAGGTGGCC
ACGGAAATGA TCCGGGTGAG CGACAACTCC GCCACCAACC TGATGATTGC CCGGGCGGGG
GGAATGGAGG CGATCAACGC CCGCTTTCAA GAGCTGGACC TGCCTTCCAC CATGGTGAAC
AACTGGCTGC CGGATCTCGA CGGAACCAAC ACCACCAGTG CCAGAGATCT CAGCCGGGCA
ATTGCCTTGG TGGATAGCGG TGAGCTGCTG GCTCCCCGCA GCCGGGATCT GTTTCGCGAG
GTAATGGGCA CGTCGATCAC CAACACGCTG CTGCCCAGGG GCTTGATGCG CGGCCTCGGC
GGCGCCCAGG GCGAACCGGA CGCAAGCCTG GCCCGCAAGG GGTACCGCGT TTACAACAAA
ACAGGTGACA TCGGCATCGC CTACGCCGAT GCCGGGCTGA TCGAACTCCC CGACGGACGA
CGCGCAGTGG CGGGATTCCT GGTGGAGGGC CCCTTCAACG ACCCCCGATC CACCGAATTG
ATCCGTCAGC TCGCCGCCGC CATGGCACCG CACCTCAAAC CCGTCCCTGT TCCGCCCAAG
CCATGA
 
Protein sequence
MSSSRSSRRS AGWKGPAQLI LRLMLMGVGL GLLTGSGLRL LAPRVQQQEI ALPSWLADQA 
LITTLLGDAV EPPSTENATG NKTASVVAKG LKQARFAPRQ EIRALSERWL ELAAQQSNLQ
ASAYMLILDD GRFAAMQAER PMAAASSIKT PILLAVLELL DQGTLQWNEP LTLTEELVGG
GAGWMASRPL GSRFPTHEVA TEMIRVSDNS ATNLMIARAG GMEAINARFQ ELDLPSTMVN
NWLPDLDGTN TTSARDLSRA IALVDSGELL APRSRDLFRE VMGTSITNTL LPRGLMRGLG
GAQGEPDASL ARKGYRVYNK TGDIGIAYAD AGLIELPDGR RAVAGFLVEG PFNDPRSTEL
IRQLAAAMAP HLKPVPVPPK P