| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1941 |
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| Symbol | |
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| ID | 3736609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 1760196 |
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| End bp | 1761434 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637776525 |
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| Product | lycopene cyclase (CrtL-type) |
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| Protein accession | YP_382237 |
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| Protein GI | 78213458 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01790] lycopene cyclase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTGAGC CGGTGGATGT GCTTGTGCTG GGGGGTGGTC CTGCTGCCCT CTGCATCGCT
TCGGAACTGA ACCAACGGAG TGTGGCTGTT GCTGGCATCG CCCCGGATCC GGTCGACGAT
CCCTGGCCAA ACACCTACGG CATTTGGGCC GATGAACTCA AGGCGGTGGG ACTTGAGCAG
CTGTTGGAGC ACCGCTGGGG CGACACCGTA AGTTATTTCG GCGAAGGCGG TTCAACGGCT
CAGGATCAGA GCCATGCCCA TGGGATCGAC TACGGCCTGT TCGATCGGGC GGCATTGCAG
CGCTACTGGC TGGAGCAGGC TGAGGGTGTG GTCTGGCATC AAGACACCGC TGAACGGGTG
GAGCTGAATG GTGCAACCAC CAACGTGTGC TGCGCATCGG GAACCACCAT GCAGGCGCGC
TTGGTGATCG ATGCCTCCGG TTCACGCACG TCTCACATTC GCCGCCCCGA TCAGGGGCCG
GTGGCAGGCC AGGCTGCCTA CGGCGTGGTG GGGCGTTTCT CCAAACCGCC GATTGAGCCA
GGCCGGTTTG TGTTGATGGA CTACCGCTGC GATCACCTCA GTGAGGAGCA GCGCAGTGAA
CCACTCACGT TTTTGTATGC GATGGATCTG GGCGATGGGG TGTTCTTCGT GGAGGAAACC
TCGCTCGCCT TGGCGCCAAG TGTTCCCTAC GAAGTGCTCA AGCAACGGCT CCAGCAGCGC
TTGGATCTGC GCGGCGTGCA GATCACCGAG GTGATCCACG AAGAGTTCTG CCTCTTCCCG
ATGAACCTGC CGCTGCCGGA TCGCAATCAG CCGGTGCTGG CCTTTGGGGG CGCCGCGAGC
ATGGTGCATC CGGCCTCGGG CTACATGGTG GGATCGCTGC TGCGGAGGGG GCCTCATCTG
GCTGATGCTG TTGCCGAAGC CCTCGCCAAT CCAGCCCTTG GTTCAGCCGT CTTGGCGCAA
CGGGGTTGGC AGGCGCTCTG GCCGATCGAG TTGGTGCTGC GCCATCAGCT CTATCAATTC
GGCTTGGGCC GTTTGATGGG CTTCAACGAA GCGTTGCTGC GCACCCACTT CGCCACCTTC
TTCTCACTGC CTCGAGAGGA GTGGTTTGGC TTCCTCACCA ACACACTGCC GCTGCCTCGG
CTGATGGGCG TGATGCTGAG ATTGTTTGCT TTATCCCCTT GGGAATTACG GCGTGGGTTG
GTGTTGGGGG CGGCTCAGGA TCAAGCCCCT CGGTTTTGA
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| Protein sequence | MAEPVDVLVL GGGPAALCIA SELNQRSVAV AGIAPDPVDD PWPNTYGIWA DELKAVGLEQ
LLEHRWGDTV SYFGEGGSTA QDQSHAHGID YGLFDRAALQ RYWLEQAEGV VWHQDTAERV
ELNGATTNVC CASGTTMQAR LVIDASGSRT SHIRRPDQGP VAGQAAYGVV GRFSKPPIEP
GRFVLMDYRC DHLSEEQRSE PLTFLYAMDL GDGVFFVEET SLALAPSVPY EVLKQRLQQR
LDLRGVQITE VIHEEFCLFP MNLPLPDRNQ PVLAFGGAAS MVHPASGYMV GSLLRRGPHL
ADAVAEALAN PALGSAVLAQ RGWQALWPIE LVLRHQLYQF GLGRLMGFNE ALLRTHFATF
FSLPREEWFG FLTNTLPLPR LMGVMLRLFA LSPWELRRGL VLGAAQDQAP RF
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