Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1905 |
Symbol | |
ID | 3737273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 1726577 |
End bp | 1727746 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637776488 |
Product | beta-lactamase class C and other penicillin binding proteins |
Protein accession | YP_382201 |
Protein GI | 78213422 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0068252 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTTTCG GATGCATTGG CGCAATCGGC CTTGCGGGAT CCATCACTCT TTTGACAGGG TTACCGTCTA AACCAGCACT GGCAGAGGCC CCGTTCAGCC AAGTGCAACA GCGGATTGAA CATTTGCGGC GGGAGCACAA CATTCCCGGG GCCTCGATCG CCGTAATTGA CGACGGACAA ATCGCCTGGG CGCGAGGCTT TGGATTTGCG GATCTGTCTA GCGGTCGACC GGTCACTGCC GACACGCTGT TTCAGGCTCA GTCGATCACC AAAACTCTCA CATCCTTAGC AACGGTCAAG CTCCTCGCCA ACCGTGAGAT TGCCTTGGAT GAACCCGTTA ACCGTTACTT GAAGGGTTGG ACAATCCCAG AGAACGCCTA CACCAAAAAG GTTCCGGTCA GTTTCCGCAT GCTGCTGAAC CACACAGGCG GTTTGAGCAA TCCGTACCCA GATGGGTGCT GCGGCCCAAT GGAGAAATTG CCGACACTGC AGCAAGTGTT GCGTGGACTA CCTCCTGCAA CGAACAAACC CCTCACCGTT GAACGGATCC CCGGAACAGC CTTCAGCTAC TGCAACGGCT GTTACACGGT GCTGCAGCCG GCCTTGGAAT CAATCAGCCA AAAACCATTC CCCAGCTTGA TGCAGGAGTT GGTGCTCACA CCCGCAGGCA TGAACAAGAG CACCTTTGAC AACACCTTTT TTCTCAACGA CTCCAGCACC ATCGCCATCC CCTACGACGT TGATGGGAAG CCCCACGGTC GGGCACCCAT GCGGCATCCC ATCCTTTCCA CCGGTTTGAT GTGGAGCACA GCGAGCGATC TGGCTCGTTT TAACCTCGCC TTCACAAAGG CGCTGAACTC CGGCCACTCA CTGATCGATC AACACCTCGC CAAGCAACTC AGCATCCCCA GTTCCACTGC AAACCGCAGC ATGGGGTTTG AACTAGGCAA CCGCGACGCA GACGCCAAAG CAAGGGGCGA TTACCTGTTT CATTCGGGAA CAGGCAACGG TGCCGTCAGC CTTTCAATCA TCAGCATGGA TGGAAATCAC GGGGCTGTGT TCTTGATCAA CAAAGGACCA AACCCCTGGC TGTCAACAAA CATTCCACAG TTTGCGTTCA TCAAGGAGGG CCTTAAGGTG ATTAATACAG AGGCCGAGTG GCCAAACTAA
|
Protein sequence | MSFGCIGAIG LAGSITLLTG LPSKPALAEA PFSQVQQRIE HLRREHNIPG ASIAVIDDGQ IAWARGFGFA DLSSGRPVTA DTLFQAQSIT KTLTSLATVK LLANREIALD EPVNRYLKGW TIPENAYTKK VPVSFRMLLN HTGGLSNPYP DGCCGPMEKL PTLQQVLRGL PPATNKPLTV ERIPGTAFSY CNGCYTVLQP ALESISQKPF PSLMQELVLT PAGMNKSTFD NTFFLNDSST IAIPYDVDGK PHGRAPMRHP ILSTGLMWST ASDLARFNLA FTKALNSGHS LIDQHLAKQL SIPSSTANRS MGFELGNRDA DAKARGDYLF HSGTGNGAVS LSIISMDGNH GAVFLINKGP NPWLSTNIPQ FAFIKEGLKV INTEAEWPN
|
| |