Gene Syncc9605_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1905 
Symbol 
ID3737273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1726577 
End bp1727746 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content55% 
IMG OID637776488 
Productbeta-lactamase class C and other penicillin binding proteins 
Protein accessionYP_382201 
Protein GI78213422 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0068252 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTCG GATGCATTGG CGCAATCGGC CTTGCGGGAT CCATCACTCT TTTGACAGGG 
TTACCGTCTA AACCAGCACT GGCAGAGGCC CCGTTCAGCC AAGTGCAACA GCGGATTGAA
CATTTGCGGC GGGAGCACAA CATTCCCGGG GCCTCGATCG CCGTAATTGA CGACGGACAA
ATCGCCTGGG CGCGAGGCTT TGGATTTGCG GATCTGTCTA GCGGTCGACC GGTCACTGCC
GACACGCTGT TTCAGGCTCA GTCGATCACC AAAACTCTCA CATCCTTAGC AACGGTCAAG
CTCCTCGCCA ACCGTGAGAT TGCCTTGGAT GAACCCGTTA ACCGTTACTT GAAGGGTTGG
ACAATCCCAG AGAACGCCTA CACCAAAAAG GTTCCGGTCA GTTTCCGCAT GCTGCTGAAC
CACACAGGCG GTTTGAGCAA TCCGTACCCA GATGGGTGCT GCGGCCCAAT GGAGAAATTG
CCGACACTGC AGCAAGTGTT GCGTGGACTA CCTCCTGCAA CGAACAAACC CCTCACCGTT
GAACGGATCC CCGGAACAGC CTTCAGCTAC TGCAACGGCT GTTACACGGT GCTGCAGCCG
GCCTTGGAAT CAATCAGCCA AAAACCATTC CCCAGCTTGA TGCAGGAGTT GGTGCTCACA
CCCGCAGGCA TGAACAAGAG CACCTTTGAC AACACCTTTT TTCTCAACGA CTCCAGCACC
ATCGCCATCC CCTACGACGT TGATGGGAAG CCCCACGGTC GGGCACCCAT GCGGCATCCC
ATCCTTTCCA CCGGTTTGAT GTGGAGCACA GCGAGCGATC TGGCTCGTTT TAACCTCGCC
TTCACAAAGG CGCTGAACTC CGGCCACTCA CTGATCGATC AACACCTCGC CAAGCAACTC
AGCATCCCCA GTTCCACTGC AAACCGCAGC ATGGGGTTTG AACTAGGCAA CCGCGACGCA
GACGCCAAAG CAAGGGGCGA TTACCTGTTT CATTCGGGAA CAGGCAACGG TGCCGTCAGC
CTTTCAATCA TCAGCATGGA TGGAAATCAC GGGGCTGTGT TCTTGATCAA CAAAGGACCA
AACCCCTGGC TGTCAACAAA CATTCCACAG TTTGCGTTCA TCAAGGAGGG CCTTAAGGTG
ATTAATACAG AGGCCGAGTG GCCAAACTAA
 
Protein sequence
MSFGCIGAIG LAGSITLLTG LPSKPALAEA PFSQVQQRIE HLRREHNIPG ASIAVIDDGQ 
IAWARGFGFA DLSSGRPVTA DTLFQAQSIT KTLTSLATVK LLANREIALD EPVNRYLKGW
TIPENAYTKK VPVSFRMLLN HTGGLSNPYP DGCCGPMEKL PTLQQVLRGL PPATNKPLTV
ERIPGTAFSY CNGCYTVLQP ALESISQKPF PSLMQELVLT PAGMNKSTFD NTFFLNDSST
IAIPYDVDGK PHGRAPMRHP ILSTGLMWST ASDLARFNLA FTKALNSGHS LIDQHLAKQL
SIPSSTANRS MGFELGNRDA DAKARGDYLF HSGTGNGAVS LSIISMDGNH GAVFLINKGP
NPWLSTNIPQ FAFIKEGLKV INTEAEWPN