Gene Syncc9605_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1902 
Symbol 
ID3737270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1723046 
End bp1724329 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content42% 
IMG OID637776485 
ProductNa+/H+ antiporter NhaP 
Protein accessionYP_382198 
Protein GI78213419 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0607816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.757338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAC CACTCGACAT TCCGGCGATT CTGCTTTTTT TGGCAACTAT GTTTGGGGCA 
ATTAATCATA AGTTTGTCAA ACTTCCCCAT ACGATTGGAT TGATGATAGT CGCGCTGGCG
GCTAGCTTGT CTCTAATAGC GCTTGATCTA ATCTTTCCGT CCCTTGGAAT GAGTGTATTG
GTTAATAAAT TTCTCGGAAA TATTGATTTT AACGTCACGC TCATGCAAGG AATGTTGTCG
TTTCTCTTAT TTGCAGGTGC TCTTCATGTT GATCTAGATC AATTGCTCGA AAACAAGTGG
ACCATTCTTG CTTTTGCAAG CTTTGGGGTT CTTGTTTCAT CATTTGTGAT TGGAGGTGGT
TTTTGGCTTA TTTCTGGAGC GGTTGGCCTT TCTTTGCCGT TTTTGATTTG TTTGCTGCTT
GGAGTCATGG TCTCTCCAAC GGATCCCGTT GCTGTTTTAG GCGTCTTAAA AACATTGCAG
GTTCCGTCGC CTTTAAAAGC AAAGATTGCC GGTGAGAGCC TTTTTAATGA TGGTGTAGCA
GTGGTACTTT TCTCTGTTTT AGTTTCTTTG GTTTTTGGGA ACGGCGGTGA GGAAGGCTTG
GAAACCAGCT TTCAGCTCAC ATCGGTAATA TGGCTGCTGA CTAAAGAAGC CTTGGGTGGA
CTATTTCTGG GTTTGATTTC TGGCTATATC GCGTTTTGGT TGCTTCGACA AATTGATGAT
TACGTACTTG AAGTCTTGAT CACACTCGCA CTTGTAACAG GTGCTTACTC AATCGCGTTG
CATCTCCATC TGTCAGGTCC TATTGCCATG GTGATTGCAG GTTTGCTGAT TGGTAATCAA
GGCACATCAA TGGCAATGTC AGAGACGACA CGTATGCATG TTGAAACGTT CTGGGAATTG
GTTGATGAAA TTCTGAATTC AGTTCTATTT CTTCTGATTG GTCTTAAAAT TGTTTTCTTG
TTTCAGCATT CGTCATACGA GATTGCCTAT CCTCTCTTAA TTAGTTTGTT TATTGCCATC
ACTCTTTTAT CGCTTTTTGC TAGATTTGTG GCTATAGCAT TGCCTGTTCA GATCAAATCG
CTTAATTCGG AAGTGAACCC AGGAACTGTA CAGATTCTCA CCTGGGCCGG AATTAGGGGT
GGAGTTTCAG TCGCTCTCGC CCTTTCACTT CCGAGTAGTT CGGAGAGTGA GCTGCTCCTT
TTTGTTACTT ATTTAGTGGT GCTATTCTCT GTCGCTATCC AGGGATTGAC GATTGAAAAT
GTAATTAAGC GCTATTACCC TTAA
 
Protein sequence
MTKPLDIPAI LLFLATMFGA INHKFVKLPH TIGLMIVALA ASLSLIALDL IFPSLGMSVL 
VNKFLGNIDF NVTLMQGMLS FLLFAGALHV DLDQLLENKW TILAFASFGV LVSSFVIGGG
FWLISGAVGL SLPFLICLLL GVMVSPTDPV AVLGVLKTLQ VPSPLKAKIA GESLFNDGVA
VVLFSVLVSL VFGNGGEEGL ETSFQLTSVI WLLTKEALGG LFLGLISGYI AFWLLRQIDD
YVLEVLITLA LVTGAYSIAL HLHLSGPIAM VIAGLLIGNQ GTSMAMSETT RMHVETFWEL
VDEILNSVLF LLIGLKIVFL FQHSSYEIAY PLLISLFIAI TLLSLFARFV AIALPVQIKS
LNSEVNPGTV QILTWAGIRG GVSVALALSL PSSSESELLL FVTYLVVLFS VAIQGLTIEN
VIKRYYP