Gene Syncc9605_1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1894 
Symbol 
ID3737262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1717381 
End bp1717989 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content65% 
IMG OID637776477 
Producthypothetical protein 
Protein accessionYP_382190 
Protein GI78213411 
COG category[O] Posttranslational modification, protein turnover, chaperones
[R] General function prediction only 
COG ID[COG0695] Glutaredoxin and related proteins
[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.926042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCC TGCCGCTGAA GCTTGCTCCC GGCAGTGATC TGCGCCTCAG CCTCGAAGAA 
CTGGCCGAGC GGGATGGCAT CAGCGGCTTT GTTCTCGGCG TGGTCGGCAA CCTGACCAAG
GCGTCCTTTC AATGCCCCGG CCAGGCGGAG CCCACTGTGC TGGAGGGAGA CCTTGAGGTA
ATCACCCTCA ATGGAACCTT TTCCCCCGAG GGCGTTCACC TGCACCTGAG CCTCTCGGAC
GGGGCCTGTC AGGTGTGGGG AGGCCATCTG GAGCCTGGCA CGATCGTGCA GAAGGGCGTC
GACCTCCTGA TTGGCGTGCT GGAGCAACGC GAAGGCCACC CCACGCGTCA GACCGCAGCA
GCAGCGCCAA GGATCGAGAT CGCCGTGCTG CCGGGATGCC CCTGGTGCAG CCGCGCCCTG
CGCATCCTGA GAACCCTGGA TCTGCCCCAC ACCGTCACCA CCGTCAACGA CGACGCAGCC
TTCCAGGCCG TGCAGCAGCG CAGTGGAATG ACCACCTTCC CCCAGGTGTT CATCGACGGA
TCGGTGATTG GTGGCTACGA CGATCTCGCC GCCATGCAAG CCGCCGGTGA ACTCGACGCC
CTCCGCTGA
 
Protein sequence
MQPLPLKLAP GSDLRLSLEE LAERDGISGF VLGVVGNLTK ASFQCPGQAE PTVLEGDLEV 
ITLNGTFSPE GVHLHLSLSD GACQVWGGHL EPGTIVQKGV DLLIGVLEQR EGHPTRQTAA
AAPRIEIAVL PGCPWCSRAL RILRTLDLPH TVTTVNDDAA FQAVQQRSGM TTFPQVFIDG
SVIGGYDDLA AMQAAGELDA LR