Gene Syncc9605_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1821 
Symbol 
ID3736943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1660803 
End bp1662206 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content60% 
IMG OID637776408 
Productamino acid carrier protein 
Protein accessionYP_382121 
Protein GI78213342 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGTGC AAGCCGGCTA TGAGACGATC CGCCCAAACC TGTTGAAAGG CATGGGCGGA 
TTCGAGTCGA CCATTCAGGC CATCAATGGC CCGATCAACA GCATCGTCTG GGGATGGCCC
ACCGTCCTTT TGATTGCCGT GACGGGCATT CTTTTGATGG TGGGCCTGCG GTTTATGCCG
CTGCAACGGC TGGGCTATGG CATCTCGATG ATGCTGCGGC CGGCTGCATC ACAAACGGAA
GGGGAGATCA CCCCCTTTCA AGCGCTGATG ACGTCGTTGT CGGCCACGAT CGGCACGGGA
AACATCGCCG GTGTGGCCGG AGCCATCGCC GTTGGTGGCC CCGGCGCCGT CTTTTGGATG
TGGATCATCG CGATCTTCGG CATCGCCACC AAGTACGCCG AAGCAGTGCT CGCGGTTCAG
TTCCGCGAAA CCGATGGAGA CGGCAACCAC GTTGGTGGGC CGATGTACTA CATCCGCAAC
GGACTCGGCA GCGGCTGGAG CTGGATGGCG GGCCTGTTTG CCCTCTTCGG CATGTTGGCG
GGATTTGGCA TCGGCAATGG GGTTCAGGCC TTTGAGGTGT CATCTGCCCT AAGCCTGATC
GGCATCCCGA AGCTGGCCAC CGGAGTCGTT TTGGCGGCCC TGGTCTTTGC TGTCGTTATC
GGGGGGATCA AGCGCATCGC CCAGGCGGCC TCCGCCATTG TTCCGTTGAT GTCGATCCTT
TACGTCGCTG CATGCCTTCT GGTGTTGTTG GCCAATCTGG GCAGCGTGCC TGAAGCCTTC
GTCACGATTT TCTCCAACGC CTTCTCCGGC CAAGCCGCTG CCGGTGGTGC CCTCGGTCAG
GTGGTGCTGA TGGGCTTCAA ACAGGGCATC TTTTCGAATG AAGCGGGCCT CGGCAGCGCT
CCGATCGCTC ACGCAGCCGC CAAAACCGAT GATCCCGTTC GCCAGGGCAC TGTAGCCATG
CTGGGCACCT TCATCGACAC CCTGATCATC TGCACGATGA CCGCTTTGGT GATTATAACC
ACCAAAGCCA ATCTGATCCT CGATGCAGCC GGCGACAAAC TCAGTGGAGC AGACCTCTCC
ATCGCTGCCT TCAACACCGG CATCGCCGGC AGCGGCCTGG TGGTGACCCT GGGATTGGTG
GTCTTCGCCT TCACCACCAT TCTCGGCTGG AGCTTCTACG GCGAGCGCTG CACCACCTAT
CTGTTCGGCG ACTCCGCCGT TCTGCCCTTT CGTCTGACTT GGGTGGCTGT CGTCGTGATT
GGTGCTGTTG CCGGCGACCG CGGCGTGATC TGGTCGATAG CAGACACCCT GAACGGCCTG
ATGGCTCTCC CCAACCTCGT GGCATTGATC CTGCTATCCG GAACTGTGTT CAAACTCACC
AAGGCCTACA GCTTCAGCGA CTGA
 
Protein sequence
MPVQAGYETI RPNLLKGMGG FESTIQAING PINSIVWGWP TVLLIAVTGI LLMVGLRFMP 
LQRLGYGISM MLRPAASQTE GEITPFQALM TSLSATIGTG NIAGVAGAIA VGGPGAVFWM
WIIAIFGIAT KYAEAVLAVQ FRETDGDGNH VGGPMYYIRN GLGSGWSWMA GLFALFGMLA
GFGIGNGVQA FEVSSALSLI GIPKLATGVV LAALVFAVVI GGIKRIAQAA SAIVPLMSIL
YVAACLLVLL ANLGSVPEAF VTIFSNAFSG QAAAGGALGQ VVLMGFKQGI FSNEAGLGSA
PIAHAAAKTD DPVRQGTVAM LGTFIDTLII CTMTALVIIT TKANLILDAA GDKLSGADLS
IAAFNTGIAG SGLVVTLGLV VFAFTTILGW SFYGERCTTY LFGDSAVLPF RLTWVAVVVI
GAVAGDRGVI WSIADTLNGL MALPNLVALI LLSGTVFKLT KAYSFSD