| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1814 |
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| Symbol | |
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| ID | 3737147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 1652367 |
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| End bp | 1654010 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637776400 |
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| Product | oxidoreductase |
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| Protein accession | YP_382114 |
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| Protein GI | 78213335 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.315902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGTC GCTCCATGAA CTGCGATGGC CCCTGGGACG CCATTGTTGT TGGCTCGGGA
GCGAGTGGCG GCGTGGCCGC CATGACCCTG GCCGAAGCAG GAGCGAGGGT GCTCGTGGTG
GAGGCAGGAC CTGACCTCAG CAACAACCAG GCCTTCGGGA CTGAACCAGG AAATCTGCTG
CGGCGGATCG TGGGCCTGAC CAGCGGCAGC CATCGCCAGC AGTCCCAGCA TCCCGGCTAT
TGGAAAGCCA ACCCTCGTCT GTATGCCGAC GAGCGTCTGC ATCCCTACGA GCACCCGGCG
GATCAGCCGT TTCTGTGGAC GCGAGGCCTG CAGGTTGGCG GCCGCAGCCT CACCTGGGGT
GGCATCACCC TGCGTCTCTC GGATGAGGAT CTGGCCGGTG TGGATGTGGA GGGTGAACAG
GTCAGTTGGC CTTTGCGCAG CGGTGAGCTG ACTCCTCACT ACGCCGAACT GGAGCGCTGG
CTGGGTGTTC ACGGTGGGCG TGATGGTTTA AATCATCTGC CGGATGGCGA CATGCAACCG
GCTCTGGCGG CGACGCCGGC GGAACAGCGT TTTGCAGATG CTGTGCGGCA ACGGTTGGGG
TATCCCGTGA TTCCCTCAAG GGGGTTTGGT CCGGCGCCGC AAGGAGAGGA TCCCGCCTGG
CCCCGTTCCA GCAGTCGCGG CAGCAGCCTT CCTCGCGCCA TGGCCACAGG ACGCACCCAG
CTGCTCTCTG CGCATTTGGT CGAGCATCTG TTGATGGATG CCGGCGGAGA TAAAGCCATT
GGTGTGGTTG CCGTTGACCA ATCCAATGGC AACCGCAGGG AGTTGAAGGC GGATCTCGTG
GTCCTGGCTG CGTCCACGAT TCAGACCGTC TCCATCCTGT TGCGCTCCCA TCGTGGCGAA
CAGAGCAACG GTTTGGACGA CCCTTCAGGA CGACTGGGCA CACGCTTGAT GGACCATGTC
TCCACATCGC AGTTTTTTGC CTTCCCCGAG CCTGTTCCGG GGGAACAGCC GATGCTCACG
GGGGCTGGAA GCTTTTTTGT TCCCTTTGGC CGACACCTGC CATCGGCTGA TTTTCAGGGC
GGCTACGGCC TCTGGGGTGG CATTGGACGA TTTGATCCGC CGCGATGGTT ACGGCGTTGC
CCTTCGAGCA TCACCGGGTT CCTGATTGGT CATGGCGAAG TTCTCCCGCG GGCTGACAAC
AGGGTGACCT TGAGTGAGCG CACGGACCGC TGGGGCGTGT GTGTCCCCTC GATTGCTTGC
CGTTGGAGCA GCAATGAATT GGCCATGGTG AGGCACATGC GCGCCTCGAT CCAGGCCTGC
ATTACCGCCG CCGGAGGCGA AGCCAAATCG ATCAAAGACC TCTTCCACCT GCCCTTGGTT
GAGCCTTTCC TAGGAGGAGC TGTTGCGCTG TCTGACGGTG CAGCCCCCCC TGGCTACTAC
ATCCACGAGG TGGGTGGGGC TGCGATGGGG GCCAGTGTGA CTAGCAGCGT TGTTGATTCC
TCCAACCGTC TTTGGGGAGC TCCCAACGTT CTGGTGGTGG ATGGTGCCTG CTGGCCCACG
TCAGCCTGGC AAAGCCCAAC GCTGACAATG ATGGCCTTGA GCCGTCGGGC CTGCCTGTTG
GCCCTCAGTG GTCGGGGCGG ATGA
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| Protein sequence | MSSRSMNCDG PWDAIVVGSG ASGGVAAMTL AEAGARVLVV EAGPDLSNNQ AFGTEPGNLL
RRIVGLTSGS HRQQSQHPGY WKANPRLYAD ERLHPYEHPA DQPFLWTRGL QVGGRSLTWG
GITLRLSDED LAGVDVEGEQ VSWPLRSGEL TPHYAELERW LGVHGGRDGL NHLPDGDMQP
ALAATPAEQR FADAVRQRLG YPVIPSRGFG PAPQGEDPAW PRSSSRGSSL PRAMATGRTQ
LLSAHLVEHL LMDAGGDKAI GVVAVDQSNG NRRELKADLV VLAASTIQTV SILLRSHRGE
QSNGLDDPSG RLGTRLMDHV STSQFFAFPE PVPGEQPMLT GAGSFFVPFG RHLPSADFQG
GYGLWGGIGR FDPPRWLRRC PSSITGFLIG HGEVLPRADN RVTLSERTDR WGVCVPSIAC
RWSSNELAMV RHMRASIQAC ITAAGGEAKS IKDLFHLPLV EPFLGGAVAL SDGAAPPGYY
IHEVGGAAMG ASVTSSVVDS SNRLWGAPNV LVVDGACWPT SAWQSPTLTM MALSRRACLL
ALSGRGG
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