Gene Syncc9605_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1772 
Symbol 
ID3737181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1615209 
End bp1615970 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content65% 
IMG OID637776358 
ProductICC (3',5'-cyclic-nucleotide phosphodiesterase) protein 
Protein accessionYP_382072 
Protein GI78213293 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.131867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0325302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATTC TTCAACTCAG TGATCCACAC CTGGTGGCCG CTGATCAGGG GCTGGTGCGC 
GGTCGGCCGG CCCTAGCTCA CTTCGAGCGA GCTCTCCAGC TTGGTGGGGC CTTGAACCCT
GATCTGGTGC TGGTGACGGG GGACCTTTGC CAGGACGAAA GCTGGGGTGG CTATGCCCGG
CTGCGGCGAG CCCTGAGCCA ACACGTGCGC TGCTCGGTGG CCCTGCTGCC CGGCAACCAC
GATCACCCGC TGCTTCTCGA TGCGGTGCTG GGGAGACGCT GGACGACGGC TCCAGCTGAT
TTGTTGGTGC AAGGCGTGAG AGTGCTGCTG CTGAGCAGCC ATCAGGTGGG TTCAGCTGCC
GGTGCGCTCG GCTCGCTTCA GCTCCAATGG CTGGAGCAGC GCCTGCGGTG CTCGGAGCGC
CTTGATCTGC CCCTGGTGGT CGCTCTCCAC CATCCACCGA TCGCCATCGG TGATGCCGGT
ATGGATGCGA TCAGGCTCCT CGATCAGGCC TGTCTTGAGG CGCTGTTGCG TCCCCATCGG
GCCCTGCGGG CGGTGCTGTT TGGACACATC CATCAGCATT GGCAGGGATC CTGGTCCACG
CGGCCTGACG TGCTGCTGCT CGGATGCCCC TCCACGCTCT GCAGTTTCAA AGCGGTGCAG
CCCTGCCCCT TGGGTCGCGC TGATGATCCG GGGGGCAGGC TGGTCGAGCT GACGGCTGAT
GGAGCCATTC AGCACCGGGT GCTGCGCTGG AGCAGCGTCT GA
 
Protein sequence
MRILQLSDPH LVAADQGLVR GRPALAHFER ALQLGGALNP DLVLVTGDLC QDESWGGYAR 
LRRALSQHVR CSVALLPGNH DHPLLLDAVL GRRWTTAPAD LLVQGVRVLL LSSHQVGSAA
GALGSLQLQW LEQRLRCSER LDLPLVVALH HPPIAIGDAG MDAIRLLDQA CLEALLRPHR
ALRAVLFGHI HQHWQGSWST RPDVLLLGCP STLCSFKAVQ PCPLGRADDP GGRLVELTAD
GAIQHRVLRW SSV