Gene Syncc9605_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1770 
Symbol 
ID3737179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1614199 
End bp1614912 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content62% 
IMG OID637776356 
Producthypothetical protein 
Protein accessionYP_382070 
Protein GI78213291 
COG category 
COG ID 
TIGRFAM ID[TIGR02466] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.679199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0353666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGTTC TCGATCTGTT TCCCCGCTCC ATCCTTCGGG GCACCCTTCC GGATCCTCTG 
CTCCAACAGT TAATTGGGCT GAGCGAAAGC GTGCTCGCCC ATCCTGAGTC CAGCCCCGAT
GCTTCAGCGA AGCTGGCGGG TCAACTGCTT CAGCAGCGCG AACTGAGGCC TGATCAACCT
GGCGTGCAAG AGCTCAGCAA CAACCACCTG CTGCCGGCCT GTGATCGCTG GATCCGCCAT
GTGATGGACC GTCAGCCTCC CCAGGGTCGC GGCCCCTGGG TTCCCGGTCG CTACCGCCTG
CAGATGATTG ATCTCTGGCT CAATTGCCAA ACCGCCGGTG ACTACAACCC CACCCACACC
CATGGCGGCA GCTTCTCCGG AGTGATCTTT CTGAAGGTGC CACCACAGAT CAACGCCAAC
AGTTTTGATG GCCAACTCTG CTTCCACGGC CCGGAGGACT GGCACATTCA GTCGTTCCGC
ACCGGCATGG CGCACTACGT GCTGCCTGTG CCCGGTGAGT TCTATGTGTT CCCGGCCTGG
CAACCCCATT CGGTGATGCC CTTCCGAGGG GATGGTGAAC GCTGGTCGCT GGCGTTCAAT
GTGGTGGCGG CCCCCGGTGT TCCTCCCACA GCGATGCAGC AGCCCGCCCC CCAGCAACAA
CCCCTGGGCA ACGTCTCGCT CTCGAGTCAG CGACCCACGG CCAAGGGCTT CTGA
 
Protein sequence
MDVLDLFPRS ILRGTLPDPL LQQLIGLSES VLAHPESSPD ASAKLAGQLL QQRELRPDQP 
GVQELSNNHL LPACDRWIRH VMDRQPPQGR GPWVPGRYRL QMIDLWLNCQ TAGDYNPTHT
HGGSFSGVIF LKVPPQINAN SFDGQLCFHG PEDWHIQSFR TGMAHYVLPV PGEFYVFPAW
QPHSVMPFRG DGERWSLAFN VVAAPGVPPT AMQQPAPQQQ PLGNVSLSSQ RPTAKGF