Gene Syncc9605_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1709 
Symbol 
ID3737290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1565410 
End bp1565880 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content59% 
IMG OID637776299 
Producthypothetical protein 
Protein accessionYP_382013 
Protein GI78213234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.671245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00378463 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATGCACA TCAATGGTGT CACGCAATAT GACATCGCCA GGGAGTTGGG AGTGACGCAA 
GCGCGGGTCA GTCAGTTCAT CCAGCAGGCG GCACGCAGCC ACCCGGTGAA CAAGCTCTCG
CTGGATGAGC GCATGGCGAT CAGTGAAGAG CGCTGGAATC TCAGCGAACG CGAAATGCGC
GAGGCAATCA CCCAGCAACG GCTCAACGGT CGCACCGTCA CGGAAACGGT CACCGAGCCC
AGTGGTCGGA TCACCACCAA GGTCACGCGT CAGGCTGGCG TTGACCCTGC CTTGCTTCGT
GCCCTCTTAA CGCATCACGA TCGCCGCGCA CGGCAACTCA ACAACCAACT GAGCCCTGAC
ACTGGCGTCC AGGCGGTGCA GGTCAACGTG GTGAAGGATT TCATCCAGCA AGGTGAGACC
GCTGGAAAGC TCACGCCAGA GCAGTGGAAT CAGCAGGCGA TTGACGTGTA A
 
Protein sequence
MMHINGVTQY DIARELGVTQ ARVSQFIQQA ARSHPVNKLS LDERMAISEE RWNLSEREMR 
EAITQQRLNG RTVTETVTEP SGRITTKVTR QAGVDPALLR ALLTHHDRRA RQLNNQLSPD
TGVQAVQVNV VKDFIQQGET AGKLTPEQWN QQAIDV