Gene Syncc9605_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1701 
Symbol 
ID3737282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1558148 
End bp1559164 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content49% 
IMG OID637776291 
Productcarbamoyl-phosphate synthase L chain 
Protein accessionYP_382005 
Protein GI78213226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.282568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0132505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGCC GCTTCACCAT CGGGCTGCTG GCTTCAGCCA TCGCCATTGC ACCCCTACCA 
ACCAAGGCAG AGGACGGCAC CGCAGAAGAC CTTGGTGATG TGATGAGCAT CAGCCTCAAG
GATGTGGTCA AACCCACCAT TGGGTTTCAA GGTGCACTCC AAGGTGCAGG CACACCAAAC
CAAGCGGGCA TTGGCGGGTT TCTTCCACTG TCTGTTGGAG AGAACAGCAT TTGGTTCCTT
GATGCCCTGG TCAATGCCAG CTTTGCTGAT CGTGAGGGCT ACAGCAGCAT CATCAACACC
GACGTTGCTG GTGGAACTGT CTCCACCTCC ACTCGACTTG GTTACCGCTG GCTGAATGGT
GATCGCAGCT GGATGTTCGG GCTGAATGGC GGTTATGACA GCCGACCAGT GAAATCAGGT
GGAACTGACA CTGGTATCAG CGTCACCAAT GAGCGCACAG CCTTCTTTCA GCAGATCGCA
CTGAATGCAG AAGCGGTCTC AAATAGTTGG ACATTCAACG CCTATGGACT GCTGCCTGTT
GGTGATGTTG AACAGAAGCT CAACAGCTTT TATCAAGGCG GTGCAATGAA CACCTATGGA
TTAGATGTTG GCTATTTCAT AACCCCAGCA CTCCATGCAT CCGCTGGTTA TTACTACCAA
CATCGAGAGG AGGAACATAT TGATGGTTCT GCAGTACGTG GACGTTTGGC CTATGAGATC
AGCGATGGCT TAACAGCTGG CTTAAATGTC TCGCACGATT TTCAAGAGTC AGATCACTTT
GAAACAAGAG TTTCTGCTGA CCTAAAAGTA CGCTTTGGTG GGGCTAGAAC AACAGCAATG
CGAAAGAAGG TTCAACAACT ACCTGTAATT AATGCCTTAA CATCAACACC AAGCAACCGG
GATGTGCGTG TACATGACCT TAACATCTTC GTGTGCATCT TTAACATCTG GAAATGCAGA
GACGATGTGA AAAAATGTCA AGATAAGTAT GGGGCGAAGG ATAAACGATG TAGATAG
 
Protein sequence
MLRRFTIGLL ASAIAIAPLP TKAEDGTAED LGDVMSISLK DVVKPTIGFQ GALQGAGTPN 
QAGIGGFLPL SVGENSIWFL DALVNASFAD REGYSSIINT DVAGGTVSTS TRLGYRWLNG
DRSWMFGLNG GYDSRPVKSG GTDTGISVTN ERTAFFQQIA LNAEAVSNSW TFNAYGLLPV
GDVEQKLNSF YQGGAMNTYG LDVGYFITPA LHASAGYYYQ HREEEHIDGS AVRGRLAYEI
SDGLTAGLNV SHDFQESDHF ETRVSADLKV RFGGARTTAM RKKVQQLPVI NALTSTPSNR
DVRVHDLNIF VCIFNIWKCR DDVKKCQDKY GAKDKRCR