Gene Syncc9605_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1650 
Symbol 
ID3736813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1517849 
End bp1519429 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content67% 
IMG OID637776238 
ProductDNA helicase/exodeoxyribonuclease V, alpha subunit 
Protein accessionYP_381954 
Protein GI78213175 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGT TGCTGCCCCC GGGAACCAGC ACGTGGCCCG CCAGCTTCAC GGCTGGCCTC 
CATGTCGCTC TGCGGCGTCG GATCCCGCCC CAAGTGGATG GCCCCCCTTT AGAGGAGCTC
AGTCGCGACC TGGTGACGGC CTTGGAGCAG GGGGAGTTGA CGGTGGCGCT GACGCCGGAA
CGGCTGGCCG TTGCCCAAGC CAGTGGCTGG CTTGAGGGGG ATGCCTCCCC CCTGCTGCTT
CAGGCTGATC GGTTGGGCTG GCGCCGCTGG TTGCAGGCCA TGGAGCAGGT GGTGACCGAG
CTGGTGGAGC GGGCCCACGC TCCGGTTCCC AAGCCCGTCA AGGCTGTCGA TCCCGAGCTG
TCGGATCGTC TCAACGCTGA ACAGTGCGCT GCCGTGCGCG CCTTGGATCA GGCCTCGGTT
GTGCTGCTCA GCGGTGGTCC GGGTACGGGC AAAACCAGCA CGGTGGTGGA GATTCTGGCC
CGGGCGGAAG CCCGCCATCC CGGCCTGCGC ATTGGTTTGG CGGCCCCCAC CGGCAAGGCG
GCCCGGCGCC TGGGGGATGC GGTGCTGGCG CAACGGGCTC CGTTGCCTTG CAGCACCCTC
CACCGCTGGT TGGAGGCCGG CAGCCGTGGC TTTGGCAGGC ACCGCCAGCG TCCCTTGGAG
CTGGATCTGC TGGTGATCGA TGAGATGTCG ATGCTGGATC TGGCCTTGAC CCAGGTCCTG
CTCGAGGCGT TGCCCAGCGG TTGCCGGCTG CTGTTGGTGG GGGATCCAGC CCAACTGCCG
CCGGTGGGGA GTGGAGCGGT CTGGCACCGG CTTCAGCAGC CGGACGTTCG CAGTCGCTTC
GGTGAAGGGG CGGTGCACCT CGAGCGCACT TATCGCAACC GCGGTGCCCT GGCCCAGGTG
GCGCACCAGC TGCGCCAGGG GGATCTGGCC GCGTTCGCTG CGGATTTGGC TGCGTTGCCT
GCGCAGGCCA ATCTGCAGGT GCATCCCAGC CCCCTGCGTC GTTTTCCAGC CTTGGTGCGC
CAGCGCTGGC TTGAGCGCCT CCAGCTGCTG CAGGCGCGGA CGGTTGATCT CAACCGCTGC
AGCGAAAAGG AGCTGATGGC GGAGTCCCGG CCCTTGTTTG CGCTGCTCGA GCAGGATCTG
TTGCTCTGTC CACGCCGCCG GGGGCCGTGG AGTCTTGATG ATGTGCACCG CACGCTGCTG
GGGGCCAATG CCGCCGGCAA GGTTGAGCGT TGGCCGATCG GCTTGCCGGT GATCTGCGGC
AGCAATCAAC CGGAACTCGG TTTGGCCAAT GGCGATCTCG GGGTTGTGAT CGGGGCAGGC
TCTGAACGAC GCCTGTTGTT CCAGGTGGTG GATCCGGATG GCCAGCTGCA GGTGCGCCGT
TTGCATCCAG CTCGTTTGCG GCGTCTGGAG CCGGCGGTGG CGCTCACCAT CCATCGGGCT
CAGGGCAGTG AGGCGGATCG GGTGATCGTG CTCTGGCCCG ATCCCCTCGA GGATGGCCCG
GCTGCTGACC ATCAACGCCG TTTGCTTTAC ACAGCGATCA CTCGAGCCCG TGCCAGCCTT
GATCTGGTGA CGCTGATCTG A
 
Protein sequence
MTELLPPGTS TWPASFTAGL HVALRRRIPP QVDGPPLEEL SRDLVTALEQ GELTVALTPE 
RLAVAQASGW LEGDASPLLL QADRLGWRRW LQAMEQVVTE LVERAHAPVP KPVKAVDPEL
SDRLNAEQCA AVRALDQASV VLLSGGPGTG KTSTVVEILA RAEARHPGLR IGLAAPTGKA
ARRLGDAVLA QRAPLPCSTL HRWLEAGSRG FGRHRQRPLE LDLLVIDEMS MLDLALTQVL
LEALPSGCRL LLVGDPAQLP PVGSGAVWHR LQQPDVRSRF GEGAVHLERT YRNRGALAQV
AHQLRQGDLA AFAADLAALP AQANLQVHPS PLRRFPALVR QRWLERLQLL QARTVDLNRC
SEKELMAESR PLFALLEQDL LLCPRRRGPW SLDDVHRTLL GANAAGKVER WPIGLPVICG
SNQPELGLAN GDLGVVIGAG SERRLLFQVV DPDGQLQVRR LHPARLRRLE PAVALTIHRA
QGSEADRVIV LWPDPLEDGP AADHQRRLLY TAITRARASL DLVTLI