Gene Syncc9605_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1643 
Symbol 
ID3735563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1512604 
End bp1514409 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content64% 
IMG OID637776231 
ProductATPase 
Protein accessionYP_381947 
Protein GI78213168 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGAAC GAACCCTCAG GAAAGCTTCA GCAACGCGCT CCCCCCTGAT GCGATTGTTA 
GGCCATCTGG CGCCCCAAAG CCGCCTGGTG GTTGCAGCGG TGACCTGCTC CCTGCTCAAC
AAGCTCTTCG ATCTGGCGCC GCCGATCTTG ATAGGCTTGG CCGTGGATGT GGTGTTGCTC
AAAGAGCAGT CCGTGCTGGC GGGTTTCGGG CTGAAGACCG CCGGCCATCA ACTGTTGGGT
CTGGCCCTGC TCACTTTTGT GATCTGGGCG GCGGAGTCGC TGTTCGAGTA CCTCTACGAC
GTGCTCTGGC GCAACCTGGC GCAAACCACC CAGCACAGCC TGAGGCTCGA GGCCTACGAC
CATCTGCAGA AGCTGGAGCT GTCCTTTTTC GAGCAGGACA GCACCGGGCG CCTGATGGCG
GTGCTCAATG ACGACATCAA CCAGCTCGAA CGGTTTCTGG ATCGGGGTGC TAATCAGATC
CTGCAGTTGA TCACCACCGT GCTGGTGGTG GGCATTGGCA TGGCGATGGT GGCGCCGGAG
GTGGCGCTGT TCGCTTACCT GCCGATCCCG GTGATTCTTT GGGGATCGCT GCATTTCCAG
CGCCAGCTGG CGCCGCGCTA CCGGGAGGTG CGCGCCCGGG TGGGCGATCT CTCCTCCCGG
CTCGCCAACA ACCTGGGGGG GATGCTCACG ATCAAGAGCT TCACCGCTGA AGCTCTGGAA
CTGGAGCGCC TGCGGGCAGA AAGCCTGGCC TACCGCCAGA GCAATGCCGG GGCGATTCGT
CTCTCGGCGG CCTTCATCCC CTTGATTCGC TTCGCGATTT TGTTCGCCTT CCTGGCGATC
CTGTTGATCG GTGGGTTCAA GGCTCTGGCC GGTGAACTTC CGGTGGCCAC CTACAGCGTT
CTGGTGTTCA TCACCCAGCG GCTGCTCTGG CCGTTAACCG CCATTGGCCG AACTCTGGAT
GAATACCAGC GCTCGATGGC CTCCACGCAA CGGGTGCTTG ATCTGATTGA CACGCCGGTG
TTGATCCAGG GAGGAACGGT GCCGGTGGAT CCGCAGCGGC TGCGGGGTGA GATTCGCTTT
GAAGCGGTGG ATTTCGGCTA TGCCGGTCGA GGAACGCTGC TGCAGGGCTT CGATCTCACC
GTGCCGGCGG GTTCGACTCT AGGCATCGTC GGGGCAACGG GCTCCGGCAA GAGCACCGTG
GTGAAGCTGC TCTTGCGGCT GTACGAGCGT GATGGCGGAC GCATCTGCCT GGATGGGGTC
TCCATCGACA CCCTGCAGCT GCAGGACCTG CGTCGCTGCA TCGCCCTGGT GAGCCAGGAC
GTCTACCTTT TCCACGGCAC CGTGGCCGAG AACATCGCCT ATGGGGTCGC GGATCCCGAT
CCGCTGGCGA TTGAGCAGGC CGCTCGCCTG GCGGAAGCCG CTGGCTTCAT CGACGCCTTG
CCCCAGAGGT ACGACACCCT GGTGGGGGAG CGGGGGCAGC GCCTCTCGGG CGGACAACGC
CAGCGCATCG CCCTGGCCCG CGCCATCCTC AAGGATGCAC CGGTGCTGGT GCTTGATGAA
GCCACTGCAG CAGTGGACAA CGACACCGAA GCCGCGATTC AGCGCTCCTT GGTGCAGATC
ACCCAGCAGC GCACCACCGT GGTGATCGCC CACCGGCTCA GCACGGTTCG CCATGCCGAC
TGGATCGTGG TGATGGACCA GGGCCGGATT GTGGAGCAGG GCTGTCACGA CAGCCTGGTG
GCCCAGGGCG GGATGTACAC CAACCTCTGG CAGGTGCAGG CCGGCGAAGG GGTTGTCGCT
TCCTGA
 
Protein sequence
MSERTLRKAS ATRSPLMRLL GHLAPQSRLV VAAVTCSLLN KLFDLAPPIL IGLAVDVVLL 
KEQSVLAGFG LKTAGHQLLG LALLTFVIWA AESLFEYLYD VLWRNLAQTT QHSLRLEAYD
HLQKLELSFF EQDSTGRLMA VLNDDINQLE RFLDRGANQI LQLITTVLVV GIGMAMVAPE
VALFAYLPIP VILWGSLHFQ RQLAPRYREV RARVGDLSSR LANNLGGMLT IKSFTAEALE
LERLRAESLA YRQSNAGAIR LSAAFIPLIR FAILFAFLAI LLIGGFKALA GELPVATYSV
LVFITQRLLW PLTAIGRTLD EYQRSMASTQ RVLDLIDTPV LIQGGTVPVD PQRLRGEIRF
EAVDFGYAGR GTLLQGFDLT VPAGSTLGIV GATGSGKSTV VKLLLRLYER DGGRICLDGV
SIDTLQLQDL RRCIALVSQD VYLFHGTVAE NIAYGVADPD PLAIEQAARL AEAAGFIDAL
PQRYDTLVGE RGQRLSGGQR QRIALARAIL KDAPVLVLDE ATAAVDNDTE AAIQRSLVQI
TQQRTTVVIA HRLSTVRHAD WIVVMDQGRI VEQGCHDSLV AQGGMYTNLW QVQAGEGVVA
S