Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1643 |
Symbol | |
ID | 3735563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 1512604 |
End bp | 1514409 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637776231 |
Product | ATPase |
Protein accession | YP_381947 |
Protein GI | 78213168 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGGAAC GAACCCTCAG GAAAGCTTCA GCAACGCGCT CCCCCCTGAT GCGATTGTTA GGCCATCTGG CGCCCCAAAG CCGCCTGGTG GTTGCAGCGG TGACCTGCTC CCTGCTCAAC AAGCTCTTCG ATCTGGCGCC GCCGATCTTG ATAGGCTTGG CCGTGGATGT GGTGTTGCTC AAAGAGCAGT CCGTGCTGGC GGGTTTCGGG CTGAAGACCG CCGGCCATCA ACTGTTGGGT CTGGCCCTGC TCACTTTTGT GATCTGGGCG GCGGAGTCGC TGTTCGAGTA CCTCTACGAC GTGCTCTGGC GCAACCTGGC GCAAACCACC CAGCACAGCC TGAGGCTCGA GGCCTACGAC CATCTGCAGA AGCTGGAGCT GTCCTTTTTC GAGCAGGACA GCACCGGGCG CCTGATGGCG GTGCTCAATG ACGACATCAA CCAGCTCGAA CGGTTTCTGG ATCGGGGTGC TAATCAGATC CTGCAGTTGA TCACCACCGT GCTGGTGGTG GGCATTGGCA TGGCGATGGT GGCGCCGGAG GTGGCGCTGT TCGCTTACCT GCCGATCCCG GTGATTCTTT GGGGATCGCT GCATTTCCAG CGCCAGCTGG CGCCGCGCTA CCGGGAGGTG CGCGCCCGGG TGGGCGATCT CTCCTCCCGG CTCGCCAACA ACCTGGGGGG GATGCTCACG ATCAAGAGCT TCACCGCTGA AGCTCTGGAA CTGGAGCGCC TGCGGGCAGA AAGCCTGGCC TACCGCCAGA GCAATGCCGG GGCGATTCGT CTCTCGGCGG CCTTCATCCC CTTGATTCGC TTCGCGATTT TGTTCGCCTT CCTGGCGATC CTGTTGATCG GTGGGTTCAA GGCTCTGGCC GGTGAACTTC CGGTGGCCAC CTACAGCGTT CTGGTGTTCA TCACCCAGCG GCTGCTCTGG CCGTTAACCG CCATTGGCCG AACTCTGGAT GAATACCAGC GCTCGATGGC CTCCACGCAA CGGGTGCTTG ATCTGATTGA CACGCCGGTG TTGATCCAGG GAGGAACGGT GCCGGTGGAT CCGCAGCGGC TGCGGGGTGA GATTCGCTTT GAAGCGGTGG ATTTCGGCTA TGCCGGTCGA GGAACGCTGC TGCAGGGCTT CGATCTCACC GTGCCGGCGG GTTCGACTCT AGGCATCGTC GGGGCAACGG GCTCCGGCAA GAGCACCGTG GTGAAGCTGC TCTTGCGGCT GTACGAGCGT GATGGCGGAC GCATCTGCCT GGATGGGGTC TCCATCGACA CCCTGCAGCT GCAGGACCTG CGTCGCTGCA TCGCCCTGGT GAGCCAGGAC GTCTACCTTT TCCACGGCAC CGTGGCCGAG AACATCGCCT ATGGGGTCGC GGATCCCGAT CCGCTGGCGA TTGAGCAGGC CGCTCGCCTG GCGGAAGCCG CTGGCTTCAT CGACGCCTTG CCCCAGAGGT ACGACACCCT GGTGGGGGAG CGGGGGCAGC GCCTCTCGGG CGGACAACGC CAGCGCATCG CCCTGGCCCG CGCCATCCTC AAGGATGCAC CGGTGCTGGT GCTTGATGAA GCCACTGCAG CAGTGGACAA CGACACCGAA GCCGCGATTC AGCGCTCCTT GGTGCAGATC ACCCAGCAGC GCACCACCGT GGTGATCGCC CACCGGCTCA GCACGGTTCG CCATGCCGAC TGGATCGTGG TGATGGACCA GGGCCGGATT GTGGAGCAGG GCTGTCACGA CAGCCTGGTG GCCCAGGGCG GGATGTACAC CAACCTCTGG CAGGTGCAGG CCGGCGAAGG GGTTGTCGCT TCCTGA
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Protein sequence | MSERTLRKAS ATRSPLMRLL GHLAPQSRLV VAAVTCSLLN KLFDLAPPIL IGLAVDVVLL KEQSVLAGFG LKTAGHQLLG LALLTFVIWA AESLFEYLYD VLWRNLAQTT QHSLRLEAYD HLQKLELSFF EQDSTGRLMA VLNDDINQLE RFLDRGANQI LQLITTVLVV GIGMAMVAPE VALFAYLPIP VILWGSLHFQ RQLAPRYREV RARVGDLSSR LANNLGGMLT IKSFTAEALE LERLRAESLA YRQSNAGAIR LSAAFIPLIR FAILFAFLAI LLIGGFKALA GELPVATYSV LVFITQRLLW PLTAIGRTLD EYQRSMASTQ RVLDLIDTPV LIQGGTVPVD PQRLRGEIRF EAVDFGYAGR GTLLQGFDLT VPAGSTLGIV GATGSGKSTV VKLLLRLYER DGGRICLDGV SIDTLQLQDL RRCIALVSQD VYLFHGTVAE NIAYGVADPD PLAIEQAARL AEAAGFIDAL PQRYDTLVGE RGQRLSGGQR QRIALARAIL KDAPVLVLDE ATAAVDNDTE AAIQRSLVQI TQQRTTVVIA HRLSTVRHAD WIVVMDQGRI VEQGCHDSLV AQGGMYTNLW QVQAGEGVVA S
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