Gene Syncc9605_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1638 
Symbol 
ID3735558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1507270 
End bp1508169 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content67% 
IMG OID637776226 
Productlipoyl synthase 
Protein accessionYP_381942 
Protein GI78213163 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGT ACAGCGCCAT CCCTCCGGTC GAGCGATTGC CGGACTGGCT GCGGCGACCG 
ATCGGCAATG CCTCGGAGTT GGAGCGGGTG CAGGGGCTGG TGAAGCAGAA CCGCCTGCAC
ACCATCTGTG AGGAGGGGCG CTGCCCCAAC CGCGGCGAGT GCTACGCCGC CGGAACGGCG
ACATTTCTCT TGGGTGGCTC GATCTGCACC CGCAGCTGTG CCTTCTGCCA GGTGGACAAG
GGCCAGGCCC CGATGCCGGT GGATGCCGCC GAAGCCGAGC GGGTGGCCGA TGCGGTGGAG
GCGATGCAGC TCCGTTATGT AGTGCTTACG GCGGTGGCCC GCGATGATCT CGCCGATCAC
GGTGCCTGCC TGTTCACTAG CACCATGGCG GCGATCCGAG CCCGCAATCC GCTGATCGCC
TTGGAGGTGC TCACCCCCGA TTTCTGGGGG GGTGTGGCGG ATCACGCTCA GGCCTTGGCG
GCCCAACGGC AGCGGCTGGC CACAGTGCTG GCAGCCCAGC CAGTGTGCTT CAACCACAAC
CTGGAAACTG TGCAGCGGTT GCAGGGGGAG GTGCGCCGCG GTGCCACCTA TGAACGATCC
CTGGGTTTAC TGGCGGCCGC CCGTGAGTTG GCGCCGGAGA TCCCCACCAA AAGTGGCCTG
ATGCTTGGCC TGGGGGAAAG CCGCGAGGAG GTGATCGCCA CCCTCCACGA CCTCCGCGCT
GTGGATTGCC AACGGATCAC CCTGGGGCAG TACCTGCGTC CCTCACTGGA GCACATCCCG
GTGGCCCGCT ACTGGACGCC GCAGGAGTTC GATGCGCTGG CGGAGGTGGC CCGAGAGCTG
GGCTTTGCCC AGGTTCGCAG TGGTCCGCTG GTGCGCAGCA GCTATCACGC TGCCGACTGA
 
Protein sequence
MSKYSAIPPV ERLPDWLRRP IGNASELERV QGLVKQNRLH TICEEGRCPN RGECYAAGTA 
TFLLGGSICT RSCAFCQVDK GQAPMPVDAA EAERVADAVE AMQLRYVVLT AVARDDLADH
GACLFTSTMA AIRARNPLIA LEVLTPDFWG GVADHAQALA AQRQRLATVL AAQPVCFNHN
LETVQRLQGE VRRGATYERS LGLLAAAREL APEIPTKSGL MLGLGESREE VIATLHDLRA
VDCQRITLGQ YLRPSLEHIP VARYWTPQEF DALAEVAREL GFAQVRSGPL VRSSYHAAD