Gene Syncc9605_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1625 
Symbol 
ID3736004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1494103 
End bp1494969 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content64% 
IMG OID637776213 
Productputative 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase 
Protein accessionYP_381929 
Protein GI78213150 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.997053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.416685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGACGC TCCTGGATCA ATTGCGGCCG GCTCTGCTTG ACCCGCAGGC CGAGTCTCTC 
GCTGCTCAGG TGCAGTGGTG GAATTTGCCT GGCCTGGGTG TTGATGATCC CTTCCCGGTG
GCGGTGCTTG GCCAAGGCTT TCCGTTGTTG CTGCTGCATG GTTTCGACAG CAGTTTTCTC
GAATACAGGC GCCTGGCTCC CCTCCTGGAT GAACGGTTTC AGCTGTTCAT CCCCGATCTG
TTCGGTTTTG GTTTCTCGCC CCGTCCCCTG GGCCTCAACT ACGGACCGGA ACCTGTTTTG
CGGCATCTCG ATGCCCTGCT GAAGCGGCTT CCCACCGAGG CTCCGGTGGG TCTGATCGGG
GCCTCAATGG GAGGGTCCGT GGCCGTGGAA TTGGCCCGGC GTCATCCCGA GCGTGTGGCT
TCTCTGCTGC TGCTGGCTCC AGCCGGTCTA ACGGGGCGGC CGATGCCTGT GCCGCCCCTG
TTGGATCGAG TTGGTGCCTG GTTCCTGGGT CGTCCCGGCG TGCGTCGGGG GCTGTGTCGC
CAAGCTTTCG CCGATCCCGA TGCGGATGTG GGAGCTCCTG AAGAGCAGAT CGCCTCGTTG
CACCTGCAAT GCCCCGGCTG GGCTGAGGCC TTGGCGGCCT TCGCCCGCAG CGGTGGTTTC
GCTGGCTCTG GCGATCCCCT GCCCTCCCAG TCACTGCACG TGATCTGGGG TGATAACGAT
CGGATTCTTC GTGCTCCGCA GAAACAGGCG CTTCAGGCCC TGCTCGATCA GCCCGTGGAG
ACCTTCCCCT CCTGCGGCCA CCTCCCCCAT ATCGATCAGC CCCGCAAGGT GGCTGAGCGT
TGTCATGCCC TGTTGACCCA TGGCTGA
 
Protein sequence
MKTLLDQLRP ALLDPQAESL AAQVQWWNLP GLGVDDPFPV AVLGQGFPLL LLHGFDSSFL 
EYRRLAPLLD ERFQLFIPDL FGFGFSPRPL GLNYGPEPVL RHLDALLKRL PTEAPVGLIG
ASMGGSVAVE LARRHPERVA SLLLLAPAGL TGRPMPVPPL LDRVGAWFLG RPGVRRGLCR
QAFADPDADV GAPEEQIASL HLQCPGWAEA LAAFARSGGF AGSGDPLPSQ SLHVIWGDND
RILRAPQKQA LQALLDQPVE TFPSCGHLPH IDQPRKVAER CHALLTHG