| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1616 |
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| Symbol | |
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| ID | 3735995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 1485785 |
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| End bp | 1486537 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637776204 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_381920 |
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| Protein GI | 78213141 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.771877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0569453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGC AGCGCCTGCA GAAACTGATC GCTGCTGCCG GCCTCTGCTC CAGGCGCCGG
GCTGAGGAAT GGTTGCAGGC CGGCCGCGTG ACGGTGGATG GTCAGGTCGC CCGCGTTGGC
GACCAGGCCG ATCCGCAGCA GCAGACGATT CATGTGGATG GTCAGCCGTT GCCGTCCCCC
GGAATGGCAC GGGTGCTGCT GATGAACAAG CCGGTGGGCG TGATCTGTAG CTGCGATGAC
CCGCAGGGTC GCCGCACGGT GCTTGACCTG CTGCCTCCGG AGCATCGGGC GGGACTTCAC
CCCGTTGGCC GCTTGGATGC CGATAGCCAT GGCGCGCTTC TGCTCACCGA TCTGGGCGAA
CTCACCTTGA AACTCACCCA CCCGCGTTAC AGCCACGCCA AGACCTACCG GGTTTGGGTG
CAGGGTGTGC CATCAGAGCC GGTTCTGGAT CGCTGGCGTC GGGGTGTGCC CCTGGATGGG
CGCTTGACCC GCCCCGCTCG GGTGCGCCAG TTGCGGACTT GGGGTGACCG CTCGCTTCTG
GAGATTGAGC TGCGGGAAGG GCGCAACCGA CAGATCCGTC GGATGGCGGA AGCTCTTGGC
TATCCGGTTG TGGACCTGCA GCGCACGGCG ATTGCTGGGT TGCCGCTCGG TGATCTGGCC
GAGGGGTGCT GGATCTGGTT GTGCGAGGGA GAATGGAAGC CCCTGCTCGA GCGGGCTGGT
TCGATGGATC TGCCCAACAG CCCATGCGAC TGA
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| Protein sequence | MTRQRLQKLI AAAGLCSRRR AEEWLQAGRV TVDGQVARVG DQADPQQQTI HVDGQPLPSP
GMARVLLMNK PVGVICSCDD PQGRRTVLDL LPPEHRAGLH PVGRLDADSH GALLLTDLGE
LTLKLTHPRY SHAKTYRVWV QGVPSEPVLD RWRRGVPLDG RLTRPARVRQ LRTWGDRSLL
EIELREGRNR QIRRMAEALG YPVVDLQRTA IAGLPLGDLA EGCWIWLCEG EWKPLLERAG
SMDLPNSPCD
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