Gene Syncc9605_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1613 
Symbol 
ID3735992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1482311 
End bp1483339 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content64% 
IMG OID637776201 
Producthypothetical protein 
Protein accessionYP_381917 
Protein GI78213138 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.899214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0629949 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCC GCCACGACTA CCGCAGCCGA CCACCCGAAC AGGTGCGCGT GGTGGTGTTC 
GGAGCCACGG GCTACATCGG CCGCTTTGTG GTGAAAGAAC TGGTGGAGCG GGGCTACCAG
GTGATCGCCT TCGCCCGCGA GCGCAGCGGC GTCGGTGGTC GCCAGAGCAG GGACGAAGTC
ATCGCGGATT TACCCGGGGC TGAGTTGCGC TTCGGGGATG TCACCGATCC AGCCTCGATC
GCAGCCGAGG CCTTCGATCA ACCCACGGAT GTGGTGGTGA GTTGCCTGGC CTCCCGCACC
GGCGGCCGCA AGGATTCCTG GGCGATTGAC CACGCAGCGA CCCTGAACAC CTACGAGCAG
GGTCGCGCTG CAGGAGCAGC CCATTTCGTG CTGCTTTCAG CCATCTGCGT GCAGAAACCA
CTGCTGGAAT TTCAGAAAGC GAAGCTGGCC TTCGAAGCCG TGTTGCAGGC GGATGAGGAG
GTGACCCACT CCATCGTTCG CCCCACCGCC TTCTTCAAAA GCCTCGGTGG ACAGGTGGAA
AGCTGCCGCA AGGGCGGCCC CTACGTGATG TTCGGAGGCG GAACCCTGGC CAGCTGCAAG
CCGATCAGCG AAGCCGATCT GGCCCGGTTC ATGGCGGACT GCATCCATGA CGAGTCCAAA
CGCAACCAGG TGCTGCCCAT CGGGGGACCG GGTCCAGCAC TGAGCGCCCG GGAGCAGGGA
GAGATGCTCT TCCGTGCATT GAACAAGCCA GAGCGCATGC TGTCGGTGCC GATTGCCTTG
ATGGATGGGC CGATCGCTCT GCTGAACGCT CTGTCTCGGC TGTTCCCAGG CATCAACGAC
ACTGCGGAGT TTGGACGCAT CGGCCGCTAC TACGCCAGCG AATCGATGCT CGTCTGGGAC
GAGCAGAGGC AGTGCTACGA CGCGGACGCA ACGCCGTCCT ATGGAACCGA CACGCTGGAG
CAGTTCTTCG AGCGTGTGGC ACGGGAGGGC ATGGCCGGGC AGGACCTGGG GGATGCCGCA
CTTTTCTGA
 
Protein sequence
MSLRHDYRSR PPEQVRVVVF GATGYIGRFV VKELVERGYQ VIAFARERSG VGGRQSRDEV 
IADLPGAELR FGDVTDPASI AAEAFDQPTD VVVSCLASRT GGRKDSWAID HAATLNTYEQ
GRAAGAAHFV LLSAICVQKP LLEFQKAKLA FEAVLQADEE VTHSIVRPTA FFKSLGGQVE
SCRKGGPYVM FGGGTLASCK PISEADLARF MADCIHDESK RNQVLPIGGP GPALSAREQG
EMLFRALNKP ERMLSVPIAL MDGPIALLNA LSRLFPGIND TAEFGRIGRY YASESMLVWD
EQRQCYDADA TPSYGTDTLE QFFERVAREG MAGQDLGDAA LF