Gene Syncc9605_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1609 
Symbol 
ID3735988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1478500 
End bp1479672 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content60% 
IMG OID637776197 
Producthypothetical protein 
Protein accessionYP_381913 
Protein GI78213134 
COG category[S] Function unknown 
COG ID[COG1649] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0289476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGTG CTTCAACGGC GTTGGCTCAA CGGTGGAGGC CATTGATTGG TGTTGCCCTG 
GCCAGCCTGA TGGCGGGGCT TCCGGCCCCT GTGATGGCCG AGTCTCGACT GGACCGGCTG
CTCCGAAACC GCAGCACCAT GGGGGTGTGG CTGACCAACA GCCCCAGCAA GCTCTATTAC
GACCGGAAGC GCATCAGCGC TGCGATGCAG CAGCTGCAGC ATGCGGGCTT CAATCGCGTG
GTGCCAAACG TTTGGAGTCG AGGCACCACC TTTCATCGCA GCCGCTTCGC TCCGGTGGAG
CCACCGCTGC AGAAGGCTGG GGTCGGACTT GATCCCATCT GCACCCTGGC GGCGGAAGGT
CGGCGCCGCG GCATCAAGGT GATGCCCTGG TTTGAGTACG GCCTGATGGA ACCGGCTGAT
TCAGCTGTTG TTCATGAGAA CCCCAGCTGG GTCTTGGCCA AAGCCAATGG CCAACGTTGG
ATGGCCATGC ATGGCAACCA TCGGATGGCT TGGCTCAATC CAGCCCATCC GGAGGTTCGT
GCCCGATTCA TTGGTTTGGT GGTGGAAACC CTCAAGCGCT GTCCGATGGA CGGCCTGCAA
CTGGACGATC ACTTCGCCTG GCCCGTTCAT TTCGGTTATG ACCCCACCAC CCTGGCGCTC
TACCGGCAGG AGACGGGACT GGCGCCTCCT GGGGATCACA GCAATCGATA TTGGATGAAA
TGGCGCCGCA ATCAACTCAC CTCGCTGCTG CGTGAATTGC GGCAACGTCT CAAGCAGGAA
GGCCTCTCCA CCCGGATCAG CTTGTCTCCA GGCCCCTTTC GTTCGGCCTA CAACCTCTGG
TTGCAGGACT GGGAGCTCTG GGCTTTGGGC GGGCTGATTG AAGAGTTGGT GGTGCAGAAC
TATGCCTATT CGGTTCGAGG ATTTGCCAAA GACCTGGATC AGCCGGCTCT GCGCAAAGCC
CGCGACTGGG GTATTCCTTC GCAGATTGGC GTGTTGGCGG GATTTGGCAA GCGCACCACT
TCGATGGCTG TTCTGGAGCA AAAAGTTCGA CTGGCCCGCC AGCGCGGTCA TGGCGTGATC
TTTTTCTACT GGGAAGGGTT ATGGGGCAAG CATGTGGCGG AGCGGTATCG AGATCCACGT
CGCGCAGCGT TCACCAGACT TGGGTCTCAT TGA
 
Protein sequence
MPGASTALAQ RWRPLIGVAL ASLMAGLPAP VMAESRLDRL LRNRSTMGVW LTNSPSKLYY 
DRKRISAAMQ QLQHAGFNRV VPNVWSRGTT FHRSRFAPVE PPLQKAGVGL DPICTLAAEG
RRRGIKVMPW FEYGLMEPAD SAVVHENPSW VLAKANGQRW MAMHGNHRMA WLNPAHPEVR
ARFIGLVVET LKRCPMDGLQ LDDHFAWPVH FGYDPTTLAL YRQETGLAPP GDHSNRYWMK
WRRNQLTSLL RELRQRLKQE GLSTRISLSP GPFRSAYNLW LQDWELWALG GLIEELVVQN
YAYSVRGFAK DLDQPALRKA RDWGIPSQIG VLAGFGKRTT SMAVLEQKVR LARQRGHGVI
FFYWEGLWGK HVAERYRDPR RAAFTRLGSH