Gene Syncc9605_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1602 
Symbol 
ID3736707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1472423 
End bp1473745 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content65% 
IMG OID637776190 
Producthypothetical protein 
Protein accessionYP_381906 
Protein GI78213127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0685513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGTC GGCCCTTGCT GCTGATGCTG ATGGCCTGCG CCGCTGTTCT GGGGCAGCAA 
CAGCTGCTGT TGCGACAGCC TCCACGTCTG CTGCGCTTGG TGCCCCAGCA GGTGCAAAGC
GGCAGCGCAG CTCTGGATCT GCAGTTCAGT CGCCCGATGG ATCGGCCCCG GGTCAGCGAG
GCCACCCGAA TCACTCCGGC CGTGCCCCAG CAGTGGCTGG GGGAGACGAC ATCACTGCGG
ATGGTGATCG ATGCGGATGT CGTGCCCAGG GCTCCGCTCG AACTATCGAT CGCAGGGGAC
GACCAACGCG GGCTGCAGCT GGAACAGCAG CAATGGTGGT GGGACCCAAG ACCCTGGCTG
ATCGCGACGC GACCTGTGCC GGAAGGCGAG CAGGTTCAAC TGCAGACGCG ATCGGGAGCG
TGGATGCCGA TCAGTGGGGT CTGGCCCGCC ATCCCCAGCG TCGTCCCCCT CGGAAATGGT
CGAGGCATTG CGCTGGTGGG ACGCGATCAG AACGGCACCG AACAGGTGTG GTGGGACCAG
CTGACGCCCC GCAGCACCGC CAACCGTCTG GCGGCCTTGG GGCCGCCAAC GCTGAGTCGC
ACAGAACCCC TGTTGAAAGG GGAGGTGCTC TTCGCCCATC TCAGCAGCAA TCTCAATGGT
GATCTGCTGG TTCAGAGCGG TGGCTTCCAG CCGGGCAGCG ACCAAGCCCT GTTGCTGCAG
GCCGATGGCA AACGCAAAGC TCTGGCTCTG AAGCCCTCCG GGCCGATGCA GTTGCTTCCG
GCTGGAGGGG GGGTGGTGAT GCCCAGCAGC AACGGGCTGA GCCTCCGGCC CCTGCAGGCA
AGCGAGCAAA AGCCGCAGAT GCTGCCGGGC AGCCGGGAGC TGGGGGCCTT CTGCGGTGCT
TCAGGACGGG CCGTGTTGAT CCGGCACTGG CCGGATTACA GGCGCTCGAT CGAGCTGGTG
GTTCCCGGGC AAGCACCAAA GCAACTGCAC CTCGGTGATC AGGCGGTGCT GGGGGTGGCC
TGCGACAACC GCGGCAAACG GATCTGGGCT GTGCTGGGGC GCTGGGAGCA GCAACGGGGC
AATCACGAAC TGGTGCTGAT CAGCGACGCG GGAGAAGTGA CACAAAGCAG GGCCCTGGAA
CCATGGACGC TCAAGGCGGG CAGCCCTATC CAGTGGAACC CTGTGACGAA TCAATTGCTG
ATGACGCTGA CCCGACCAAA GCAAACCCAT GCCCGTGCCG GCCTGATCGA TGGCGACAGC
TTGAAGCTCA TCAAGGTGAT CAACACACCC ATCAGCGAAG CCCAGTGGCT GAATGCAGGC
TGA
 
Protein sequence
MTRRPLLLML MACAAVLGQQ QLLLRQPPRL LRLVPQQVQS GSAALDLQFS RPMDRPRVSE 
ATRITPAVPQ QWLGETTSLR MVIDADVVPR APLELSIAGD DQRGLQLEQQ QWWWDPRPWL
IATRPVPEGE QVQLQTRSGA WMPISGVWPA IPSVVPLGNG RGIALVGRDQ NGTEQVWWDQ
LTPRSTANRL AALGPPTLSR TEPLLKGEVL FAHLSSNLNG DLLVQSGGFQ PGSDQALLLQ
ADGKRKALAL KPSGPMQLLP AGGGVVMPSS NGLSLRPLQA SEQKPQMLPG SRELGAFCGA
SGRAVLIRHW PDYRRSIELV VPGQAPKQLH LGDQAVLGVA CDNRGKRIWA VLGRWEQQRG
NHELVLISDA GEVTQSRALE PWTLKAGSPI QWNPVTNQLL MTLTRPKQTH ARAGLIDGDS
LKLIKVINTP ISEAQWLNAG