Gene Syncc9605_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1588 
Symbol 
ID3736693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1459383 
End bp1460081 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content44% 
IMG OID637776176 
Producthypothetical protein 
Protein accessionYP_381892 
Protein GI78213113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0233366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00932145 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTAAAA TTTTTATTCC ATTGTTCACT GCATTGCTTT TGAGTGCATG CGGACTCAAT 
AGTGAATCGG GTGTCTCCTC TAATGATGGT GATGCTAAAA CCACAGCGGA CCAAAATACC
AAAACACCAA GCATTGGTCT GAGTTCAGAA CCGAGTATTG GGAAATCAGT GTTGCTGGCT
TCACTCAAGG ATGGAGGATA TGTCATTTAT TTTCGTCATG CAACGACGGT GAAGGATTAC
GCAGACCAAG CTGATCCTCT GATGAGCCTT AATGATTGCA GTTCACAGCG AAAGCTGAGC
ACTCAGGGCA TCAAGGAATC CTACGAAATT GGCATGGCAT TTGCTGCAAA GGAGATCCCA
GTCGGTGAAA TTATTGTTAG TGAGTATTGC CGGTCCTGGA AAACAGCAAA CCTTGCATTT
GGAGAATGGA CCCAAAAAGA TTCCCGTTTA AACTTTTTAC CTTATGAGGA TTACACCAAA
AGTAATGTTG AACTGATGAA AAAGAATGTC ATGCCTTTAT TAACGCGCCC ACCTCTACCA
GGAACCAACA AAGTCATTAT CGGACATGAT GATCCTTTTG AAGCCGTGAC AGGAATTTAT
CCTGAACCGC AAGGAATCGC ATACATCCTT CAGCCCGATG GGGGAAAAAG CTTCAAGATC
ATCGATAGTG TGTTGCCGTC TGAGTGGGCA ACACTCTGA
 
Protein sequence
MSKIFIPLFT ALLLSACGLN SESGVSSNDG DAKTTADQNT KTPSIGLSSE PSIGKSVLLA 
SLKDGGYVIY FRHATTVKDY ADQADPLMSL NDCSSQRKLS TQGIKESYEI GMAFAAKEIP
VGEIIVSEYC RSWKTANLAF GEWTQKDSRL NFLPYEDYTK SNVELMKKNV MPLLTRPPLP
GTNKVIIGHD DPFEAVTGIY PEPQGIAYIL QPDGGKSFKI IDSVLPSEWA TL