Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1588 |
Symbol | |
ID | 3736693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 1459383 |
End bp | 1460081 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637776176 |
Product | hypothetical protein |
Protein accession | YP_381892 |
Protein GI | 78213113 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0233366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00932145 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTAAAA TTTTTATTCC ATTGTTCACT GCATTGCTTT TGAGTGCATG CGGACTCAAT AGTGAATCGG GTGTCTCCTC TAATGATGGT GATGCTAAAA CCACAGCGGA CCAAAATACC AAAACACCAA GCATTGGTCT GAGTTCAGAA CCGAGTATTG GGAAATCAGT GTTGCTGGCT TCACTCAAGG ATGGAGGATA TGTCATTTAT TTTCGTCATG CAACGACGGT GAAGGATTAC GCAGACCAAG CTGATCCTCT GATGAGCCTT AATGATTGCA GTTCACAGCG AAAGCTGAGC ACTCAGGGCA TCAAGGAATC CTACGAAATT GGCATGGCAT TTGCTGCAAA GGAGATCCCA GTCGGTGAAA TTATTGTTAG TGAGTATTGC CGGTCCTGGA AAACAGCAAA CCTTGCATTT GGAGAATGGA CCCAAAAAGA TTCCCGTTTA AACTTTTTAC CTTATGAGGA TTACACCAAA AGTAATGTTG AACTGATGAA AAAGAATGTC ATGCCTTTAT TAACGCGCCC ACCTCTACCA GGAACCAACA AAGTCATTAT CGGACATGAT GATCCTTTTG AAGCCGTGAC AGGAATTTAT CCTGAACCGC AAGGAATCGC ATACATCCTT CAGCCCGATG GGGGAAAAAG CTTCAAGATC ATCGATAGTG TGTTGCCGTC TGAGTGGGCA ACACTCTGA
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Protein sequence | MSKIFIPLFT ALLLSACGLN SESGVSSNDG DAKTTADQNT KTPSIGLSSE PSIGKSVLLA SLKDGGYVIY FRHATTVKDY ADQADPLMSL NDCSSQRKLS TQGIKESYEI GMAFAAKEIP VGEIIVSEYC RSWKTANLAF GEWTQKDSRL NFLPYEDYTK SNVELMKKNV MPLLTRPPLP GTNKVIIGHD DPFEAVTGIY PEPQGIAYIL QPDGGKSFKI IDSVLPSEWA TL
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