Gene Syncc9605_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1582 
Symbol 
ID3736879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1451475 
End bp1452242 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content38% 
IMG OID637776170 
Producthypothetical protein 
Protein accessionYP_381886 
Protein GI78213107 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0214214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA GTCAGATACT TTGGATTGAT CTCCAGCCAT CACTGTATTG CCTTTTCAAG 
CGAACAGCGC AAAGCTTGGG TCAAAACTTT GAAGTCAAAA GATGGTCATT CGAACATGAT
CTTGATGAAT CATGTGATGT TGAAGTCGTC CACAGCCTAA TGAGACACAC GATAGAAAAC
TCTTCAAATC CAGTTCATCT TATAGGCCAC GGAATAAGCG GTACTATTGC ATATTTATTT
GCTCAAAAAT ATCCCAACAA CATATCATCA GTTTCCGTGC TATCAGTGGA TACTAACTCG
ACAAATCAAT GGACTAGTCA TTATCAGAGT ATGCGGAGCC AATTACCCTG CTCAAGATTT
CATATTTTAA GCCATCTAAG CCGACTATTG GTAGATAGAA AAACTGAAAA AGTTGTCAAT
ATTATGGCGA GGCTGTTAGC AAAATGTTTA GATAATGATT TAGTGTATGG ATCTATTGTC
AATAGCCAAC CAATCACAAA TCTAAACAAA GCTGAGGTTC CAATACTGGT GATTAATGGT
GAAAAAGACT TTGTTGTTGA TGAGCAGAGT GAAATCAGAT GGAGACACTG CCTAAAACCT
GGAGACTGCT ACCAAAAAAT TTCTGACGGA CGCCATTTCT TCCCATTTAC AGAGTGGAAT
AAAACTGCAA AATTGATAGA ATCATTTGTC AGGATGGTAC CTGAGCAACA TCAGAACCAA
GTCCCTAATA GCTGCAAAAA TCTGAGTATT AGTAAAACCA ACTCATGA
 
Protein sequence
MSTSQILWID LQPSLYCLFK RTAQSLGQNF EVKRWSFEHD LDESCDVEVV HSLMRHTIEN 
SSNPVHLIGH GISGTIAYLF AQKYPNNISS VSVLSVDTNS TNQWTSHYQS MRSQLPCSRF
HILSHLSRLL VDRKTEKVVN IMARLLAKCL DNDLVYGSIV NSQPITNLNK AEVPILVING
EKDFVVDEQS EIRWRHCLKP GDCYQKISDG RHFFPFTEWN KTAKLIESFV RMVPEQHQNQ
VPNSCKNLSI SKTNS