Gene Syncc9605_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1577 
Symbol 
ID3736874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1447878 
End bp1448546 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content48% 
IMG OID637776165 
Productputative hydroxylase 
Protein accessionYP_381881 
Protein GI78213102 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.572766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0227046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCC TGACGCATTC TCTTTTGCCT CTTCATGAAG TTTGTGCCCT TCAGCAGCGC 
CTCAGTGCTC CCAACCTTCC CTGGCGAGAT GGCCGATTGA CTGCAGGGGA CCAGGCTGCA
TTGGTGAAGA AAAACTACCA GCTCGATCCG AATGCTGAGC TTTCACTTGC GATTAGCAAT
TGCATTTCTA CAGCATTAAC GAGTGACCCT CTTGTTAAAA GTTTTTCACT TGTTCGTAAG
GTCCATAGTT TGTTGGTTTC TAGATCAAGT GCTGGAGAAT CTTATGGATG GCATGTTGAT
AATCCTTTCT CCCGCAATGG TCGTCGGGAT TTGTCTTTCA CCTGCTTTCT CAGTGATGAA
GATTCCTATG AGGGCGGATC CTTAATGATC CAAACTGGTG GTGAGGACAC GAAGGAATTT
CGCTTGCCAC CTGGCCAAGT TGTTCTCTAT CCGTCATCCA CGCTTCATTG TGTTACACCG
GTTTTGAGCG GTGATCGTTA TGTATGTGTC GGCTGGATTG AGAGTTATGT CAAGGCAGCT
GACGACCGCT CAATGTTATT CAATATCGAT GCTGGTGCAC GGGGTTTGTT AGCTCGCCAT
GGACGATCGG ATGAACTTGA TCTGATCTTT CAAAGCTATA CGAACGCTGT CCGACGCTTG
TCGAGTTGA
 
Protein sequence
MEFLTHSLLP LHEVCALQQR LSAPNLPWRD GRLTAGDQAA LVKKNYQLDP NAELSLAISN 
CISTALTSDP LVKSFSLVRK VHSLLVSRSS AGESYGWHVD NPFSRNGRRD LSFTCFLSDE
DSYEGGSLMI QTGGEDTKEF RLPPGQVVLY PSSTLHCVTP VLSGDRYVCV GWIESYVKAA
DDRSMLFNID AGARGLLARH GRSDELDLIF QSYTNAVRRL SS