| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1534 |
|---|
| Symbol | |
|---|
| ID | 3736980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1412687 |
|---|
| End bp | 1413559 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637776122 |
|---|
| Product | phycobilisome linker polypeptide |
|---|
| Protein accession | YP_381838 |
|---|
| Protein GI | 78213059 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCCC TGAAGTACAA GCGGGATTTC ACCCACGAAC AGCGGGTGTC GTTCGCCTTT
GCGAACTCCG TGGATGCAGC CAAAAGTGCC AGCTCGAACA AGGGCAAGGC GGCATCTACA
CCTGCTGAGT ACAAGCAAAA CCAGTGCGCC GCTATGGGCA TTGGTATGGG CCCCCGGATC
CATGAGGAGT GCCCCTACTC GGCGATCAAC CACTCCTATG CCTCCACGGG CAGCCAGGCT
CTGGAAGCTG CCATCACCGC TGGCTACAAG CAGGTGTTTG GCAACATCGG CATCTCCGAC
AACCAGCGTC TTGTCTCGCT TGAAGCCTTC CTCTGTGACG GCCGCATCAA CGTTCAGGGC
TTCATGGCAG GCCTTGTGAA ATCTGAGCTG TACAAGAACA AGTTTTTCCA CGCCGTGTCT
CCCATGCGCG GTATCGAGCT CACCACCAAG CACCTGCTGG GGCGCCCTCC CATCAATCAG
AAGGAAGTGA GTGCTGGCAT TCAGCTGATC GCTGCAGAGG GTTTCGACGC TTTCGTTGAC
AGCCTCGTCC GCTCGGAGGA GTACCTCGAA ACCTTCGGAA CCGACACGGT TCCCTATCTG
CGTGGTTTCA AGTCGGAAGC ACGGGCTTCC TGCTCCACCT TCGTTGGCAT GGCCGAAATC
ACTCCGGCCA ATGCCAGCTC TGAAAACGCC ATGTACACCG GTCCCTCCCT GGTGAAGCGT
TTCAGCATGG ATCTCAATTC CTTCGCAGCA GCTGCTGTCT ATTCAGACGA CAGCGATCGT
GGTGGTTTCT CCTACACGAA CGCCGTAAGC AACCCCCGCA ACGCTGCTTA CCGCCGCATG
TATGGCGGCA AGTTCAACTA CGGCCGCTTC TGA
|
|---|
| Protein sequence | MPALKYKRDF THEQRVSFAF ANSVDAAKSA SSNKGKAAST PAEYKQNQCA AMGIGMGPRI
HEECPYSAIN HSYASTGSQA LEAAITAGYK QVFGNIGISD NQRLVSLEAF LCDGRINVQG
FMAGLVKSEL YKNKFFHAVS PMRGIELTTK HLLGRPPINQ KEVSAGIQLI AAEGFDAFVD
SLVRSEEYLE TFGTDTVPYL RGFKSEARAS CSTFVGMAEI TPANASSENA MYTGPSLVKR
FSMDLNSFAA AAVYSDDSDR GGFSYTNAVS NPRNAAYRRM YGGKFNYGRF
|
|---|
| |