Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1463 |
Symbol | |
ID | 3736055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 1371637 |
End bp | 1374132 |
Gene Length | 2496 bp |
Protein Length | 831 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637776056 |
Product | DEAD/DEAH box helicase-like |
Protein accession | YP_381772 |
Protein GI | 78212993 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0838688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCTT CAAAAGCGAA GGCGAAGGCA AAGGCCAAAC CAACAACCAA CGACCCTCGC TTGAACCCGA TTCATGCCTG GTTCGCGCAG AGAAACTGGA CACCGCTGCC GTTTCAGCAG GAGACATGGA ACGCCTATCT AGCGGGGCGG AATGGGTTAA TCCAAGTGCC CACGGGATCG GGCAAAACCT TCGCCGCTGT TATGGGACCG ATGGCGCGGA TGTTGGCGGA GGAGCAGCCG TTGAAAGGAA TACGTCTCGT CTACATCACG CCCTTGCGGG CCCTCAGCCG CGACTTGTCG CTGGCGATCC GCGAGCCGAT CGAGGCGATG GGGTGGCCGA TTCGGGTGGG CATCCGCAAT GGCGACAGCA GCAGCAGCGA ACGCACTAAA CAGCTCAAGG CGCCGCCACA GATTCTGGTG ACAACTCCGG AGTCCCTCGC CCTGCTGCTT AGCAACGCCA AGGCCGAAGA GCTGTTTGGC CAACTCGAGA CGGTGATCCT CGATGAATGG CACGAGTTGA TGGGCAGCAA ACGGGGCAGC CAGACCGAGC TGTGCCTGAG CTGGTTGCGG CAGCTGCGTC CCCAGCTCCA GACCTGGGCC ATCAGTGCCA CCATCGGCAA CATCGAGCAG GCGGCGCGCC ATGCCCTGGG GACGGCAGGC GAACCGCAGC TGATCGGGGG TGCGCCAGCC CGCAGCACGG AGATTCGGAG CATCCTTCCA GACACGATCG ATGGCTTCCC CTGGGCTGGA CACCTCGGTT TGCGTATGTA CGAGGAGCTG GTGGCCCGCC TCAATCCCGG CATCAGCACC TTGCTGTTCA CCAACACCCG CAATCAGTCA GAGCGTTGGC ACCAGTGTCT GCGCTTCGCA TGCCCGGAAA TGGAGAAGGG ATTGGCCCTG CACCACAGCG CGATTGATCG CAGTGAGCGG GAAGCGATCG AAGCCTCCGT GAAAGCCGGC AGCATTCGTT GGGTGGTCTG CACAAGCTCT CTGGATCTCG GGGTGGACTT CCAGCCCGTG GAACAGGTAG TGCAGATCGG GAGCCCCAAG AATCTGGCTC GGCTGCTTCA GCGGGCAGGG CGGTCAGCGC ACTTGCCCGG CGGAACATCC CAAGTACTGT TCATGCCCAC CAATGCCCTT GAACTGCTTG AACTCAGTGC CGTGCGGCGG GGGCTGGTGG AGGGTCTGGT GGAACAACGC AAGCCGCCGA AAGCCCCTCT TGATGTGCTG CTGCAGCACC TCACAGGGTT GGCCTGCGGC CCTGGCTTCA ATCCCGAGCA CACGTTGCAG ACCGTGCGGA GCTGTGCCGC CTACGCCGAT CTGAGTCAGG ACGACTGGGA CTGGTGCATG CTGTTTCTCG AGCAGGGCGG AGAGTGCCTG GGGGCCTATC CCCGTTACCG CAAGCTCGAG TGGGAGGAGA CAAGCCAGCG CTACCGGGTT CGAGAAAAGG CCATCGCCCG GCTGCACCGT CTCAACGTTG GAACGATCAC AGCCGCACCA GCGATCACCG TGCGGTTTGT CCGTGGTGCC GTTCTCGGCC ATGTGGAGGA GACCTTCATC AGCCAGCTCA AACCGAAGGA TGTGTTCTTC TTCTCCGGCC GCCAGCTGGA ATTCGTGCGG CTGCGGGACA TGACCGCTTA CGTGAAAGTG AGCACCAAGA AGACGCGCAC GGTGCCTGCC TGGGCAGGGG GACAGATGGC CCTCTCCGAT CTGCTGACCC ATCACCTGCG TCTCGAGGTG GACCGTGCCA GCCGGGGTGA TCTCGACAAC GCTGAACTGC AGGCTCTGAA ACCCCTGTTT GATCGACAAC AGGACATCTC AGTGCTGCCG ACGGTTGGTC AGCTGTTGAT TGAGACCTGT CGCACCCGCG AAGGCACGCA CCTGTTTGCC TACCCCTTTG AAGGACGGTT CGTACATGAG GGCATCGGCT TCCTCTGGGC GTCGCGACTC ACCCGTCTGG AGCGAGGCAC GATCACGGTG TCGGTGAACG ACTATGGCTT TGAGCTGTTG GCACCAAAGA GCTACCCCAT GGCGGAGCTG CTGGAGGACC ACATCGATCT GCTGCTCGAT CGGCAACAAC TGGAGCGGGA TCTGAAGAAC GCACTGAATC TTTCCGAGCT GCAACGGCGA CGCTTCCGCG CTATCGCCCA GATCGCTGGT CTGATGAACC GCGGCTTCCC TAGATCGAGC AAAAGCACCG GCCAACTTCA GATCAGTGCC TCGCTGCTGT TCGATGTGTT CAGCCGCCAT GAACCGAACA ATCGCTTGCT GCTGCAGGCC CAACAGGAAG TGCTCGATGA CCAGTTGGAG ATCTCACGCC TGGAGGCTGC CTTGAAACGT GCTGCAAGCC AGGAATGGCT GCACGTTGAA ACCCCTCGCC CCAGCCCGCT GGCCTTTCCG CTGCTGGTGG AACGGCTCAA CAACAGGATG AGCAATGAAT CCGTTTTGGA GCGGGTTCAG CGGATGAAGG ACGAGGCCAT CCGCAAAGAG GGTTGA
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Protein sequence | MAASKAKAKA KAKPTTNDPR LNPIHAWFAQ RNWTPLPFQQ ETWNAYLAGR NGLIQVPTGS GKTFAAVMGP MARMLAEEQP LKGIRLVYIT PLRALSRDLS LAIREPIEAM GWPIRVGIRN GDSSSSERTK QLKAPPQILV TTPESLALLL SNAKAEELFG QLETVILDEW HELMGSKRGS QTELCLSWLR QLRPQLQTWA ISATIGNIEQ AARHALGTAG EPQLIGGAPA RSTEIRSILP DTIDGFPWAG HLGLRMYEEL VARLNPGIST LLFTNTRNQS ERWHQCLRFA CPEMEKGLAL HHSAIDRSER EAIEASVKAG SIRWVVCTSS LDLGVDFQPV EQVVQIGSPK NLARLLQRAG RSAHLPGGTS QVLFMPTNAL ELLELSAVRR GLVEGLVEQR KPPKAPLDVL LQHLTGLACG PGFNPEHTLQ TVRSCAAYAD LSQDDWDWCM LFLEQGGECL GAYPRYRKLE WEETSQRYRV REKAIARLHR LNVGTITAAP AITVRFVRGA VLGHVEETFI SQLKPKDVFF FSGRQLEFVR LRDMTAYVKV STKKTRTVPA WAGGQMALSD LLTHHLRLEV DRASRGDLDN AELQALKPLF DRQQDISVLP TVGQLLIETC RTREGTHLFA YPFEGRFVHE GIGFLWASRL TRLERGTITV SVNDYGFELL APKSYPMAEL LEDHIDLLLD RQQLERDLKN ALNLSELQRR RFRAIAQIAG LMNRGFPRSS KSTGQLQISA SLLFDVFSRH EPNNRLLLQA QQEVLDDQLE ISRLEAALKR AASQEWLHVE TPRPSPLAFP LLVERLNNRM SNESVLERVQ RMKDEAIRKE G
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