Gene Syncc9605_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1450 
SymbolaroB 
ID3736042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1360583 
End bp1361698 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content63% 
IMG OID637776043 
Product3-dehydroquinate synthase 
Protein accessionYP_381759 
Protein GI78212980 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0689798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAA TCACCCCGTT GCATCACATC CGCGTTGCGC TGGAGCGCAA TCCCTACGAG 
GTGGTGATTG GAAACGGCGG CCTTGCCAGA CTTGGTCAGC AGATGCTGGA CGCTGGTGTG
CAGGCTGATC GGCGTGTGCT GGTGGTCAGC AATCCCGATG TCGCCAACCC CTATGGCGAT
GCCTGCCTTA ACAGCCTCAG AGAGGCAGGT TTCAGCGTGG AGCTTTTGGT GATTGACGCC
GGCGAACACC AGAAGACGCC CGCCACGGTG GCGGAGATCC ACGACGCGGC TTACAGCGCC
AAGCTCGAAC GCAGCTCCTT GATGGTGGCC CTTGGCGGAG GCGTTGTGGG GGACATGACC
GGTTTTGCAG CAGCCACCTG GCTGCGGGGC ATCCAGGTGG TGCAAGTGCC CACAACCCTG
CTGGCCATGG TGGATGCGTC GATCGGGGGT AAGACCGGGG TCAACCATCC CCGCGGCAAA
AACCTGATCG GTGCCTTTCA CCAGCCGCGG CTGGTGCTGA TCGATCCATC GACCCTCAAC
ACTCTGCCCG AACGCGAGTT CCGGGCCGGC ATGGCCGAAG TAATCAAGTA TGGAATCCTC
GGCGATACGG CGCTGTTCGA AGAACTGGAA GCTTGCCCCG ACCCGAGCAC GCCTGCGGGT
CTTGGTGCGG AACGCCTGAG CTCGATTCTG CAGCGATCGG CCGCGGCCAA GGCACGGGTG
GTGGCCGCCG ACGAAAAAGA AGGTAGCCTG CGGGCGATCC TCAACTACGG CCATACCTTC
GGCCATGTGG TGGAGACCCT CTGCGGCTAT GGCACCTGGC TCCATGGTGA AGCGGTCGCC
ATTGGCATGG TGGCGGTGGG CGAACTTGCG GTACTTCGGG GCAGCTGGAG CCGCGATGAT
GCTGAGCGCC AACGCCGACT GATCGAGAGC GCCGGACTCC CCACCGCCTG GCCGGATCTC
TCCGCTGATG CGGTTTTAAA CAGCCTGCAG GGGGACAAAA AGGTGCGTGA CGGCCGCCTG
CGCTTCGTGA TGCCCACCGG CATCGGATCC GTTGAGATCC GCGATGACGT CAGTCGTGAG
GAAATTCTGA GCTGCCTGGA GCGCCTGAAA GGCTGA
 
Protein sequence
MTTITPLHHI RVALERNPYE VVIGNGGLAR LGQQMLDAGV QADRRVLVVS NPDVANPYGD 
ACLNSLREAG FSVELLVIDA GEHQKTPATV AEIHDAAYSA KLERSSLMVA LGGGVVGDMT
GFAAATWLRG IQVVQVPTTL LAMVDASIGG KTGVNHPRGK NLIGAFHQPR LVLIDPSTLN
TLPEREFRAG MAEVIKYGIL GDTALFEELE ACPDPSTPAG LGAERLSSIL QRSAAAKARV
VAADEKEGSL RAILNYGHTF GHVVETLCGY GTWLHGEAVA IGMVAVGELA VLRGSWSRDD
AERQRRLIES AGLPTAWPDL SADAVLNSLQ GDKKVRDGRL RFVMPTGIGS VEIRDDVSRE
EILSCLERLK G