Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1450 |
Symbol | aroB |
ID | 3736042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 1360583 |
End bp | 1361698 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637776043 |
Product | 3-dehydroquinate synthase |
Protein accession | YP_381759 |
Protein GI | 78212980 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0337] 3-dehydroquinate synthetase |
TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0689798 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACAA TCACCCCGTT GCATCACATC CGCGTTGCGC TGGAGCGCAA TCCCTACGAG GTGGTGATTG GAAACGGCGG CCTTGCCAGA CTTGGTCAGC AGATGCTGGA CGCTGGTGTG CAGGCTGATC GGCGTGTGCT GGTGGTCAGC AATCCCGATG TCGCCAACCC CTATGGCGAT GCCTGCCTTA ACAGCCTCAG AGAGGCAGGT TTCAGCGTGG AGCTTTTGGT GATTGACGCC GGCGAACACC AGAAGACGCC CGCCACGGTG GCGGAGATCC ACGACGCGGC TTACAGCGCC AAGCTCGAAC GCAGCTCCTT GATGGTGGCC CTTGGCGGAG GCGTTGTGGG GGACATGACC GGTTTTGCAG CAGCCACCTG GCTGCGGGGC ATCCAGGTGG TGCAAGTGCC CACAACCCTG CTGGCCATGG TGGATGCGTC GATCGGGGGT AAGACCGGGG TCAACCATCC CCGCGGCAAA AACCTGATCG GTGCCTTTCA CCAGCCGCGG CTGGTGCTGA TCGATCCATC GACCCTCAAC ACTCTGCCCG AACGCGAGTT CCGGGCCGGC ATGGCCGAAG TAATCAAGTA TGGAATCCTC GGCGATACGG CGCTGTTCGA AGAACTGGAA GCTTGCCCCG ACCCGAGCAC GCCTGCGGGT CTTGGTGCGG AACGCCTGAG CTCGATTCTG CAGCGATCGG CCGCGGCCAA GGCACGGGTG GTGGCCGCCG ACGAAAAAGA AGGTAGCCTG CGGGCGATCC TCAACTACGG CCATACCTTC GGCCATGTGG TGGAGACCCT CTGCGGCTAT GGCACCTGGC TCCATGGTGA AGCGGTCGCC ATTGGCATGG TGGCGGTGGG CGAACTTGCG GTACTTCGGG GCAGCTGGAG CCGCGATGAT GCTGAGCGCC AACGCCGACT GATCGAGAGC GCCGGACTCC CCACCGCCTG GCCGGATCTC TCCGCTGATG CGGTTTTAAA CAGCCTGCAG GGGGACAAAA AGGTGCGTGA CGGCCGCCTG CGCTTCGTGA TGCCCACCGG CATCGGATCC GTTGAGATCC GCGATGACGT CAGTCGTGAG GAAATTCTGA GCTGCCTGGA GCGCCTGAAA GGCTGA
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Protein sequence | MTTITPLHHI RVALERNPYE VVIGNGGLAR LGQQMLDAGV QADRRVLVVS NPDVANPYGD ACLNSLREAG FSVELLVIDA GEHQKTPATV AEIHDAAYSA KLERSSLMVA LGGGVVGDMT GFAAATWLRG IQVVQVPTTL LAMVDASIGG KTGVNHPRGK NLIGAFHQPR LVLIDPSTLN TLPEREFRAG MAEVIKYGIL GDTALFEELE ACPDPSTPAG LGAERLSSIL QRSAAAKARV VAADEKEGSL RAILNYGHTF GHVVETLCGY GTWLHGEAVA IGMVAVGELA VLRGSWSRDD AERQRRLIES AGLPTAWPDL SADAVLNSLQ GDKKVRDGRL RFVMPTGIGS VEIRDDVSRE EILSCLERLK G
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